Keyword search (4,163 papers available)

"Biomass" Keyword-tagged Publications:

Title Authors PubMed ID
1 eDNA Provides Accurate Population Abundance Estimates With Bioenergetics and Particle Mass-Balance Modelling Beaulieu J; Yates MC; Fraser DJ; Cristescu ME; Derry AM; 41913704
BIOLOGY
2 Fortifying the Rasamsonia emersonii secretome with recombinant cellobiohydrolase (GH7) for efficient biomass saccharification Raheja Y; Singh V; Gaur VK; Sharma G; Tsang A; Chadha BS; 40622460
GENOMICS
3 Production and characterization of magnetic Biochar derived from pyrolysis of waste areca nut husk for removal of methylene blue dye from wastewater Chistie SM; Naik SU; Rajendra P; Apeksha None; Mishra RK; Albasher G; Chinnam S; Jeppu GP; Arif Z; Hameed J; 40603323
ENCS
4 Evaluating Sustainable Practices for Managing Residue Derived from Wheat Straw Shanmugam H; Raghavan V; Rajagopal R; Goyette B; Lyu L; Zhou S; An C; 38927790
ENCS
5 Diverse Applications of Biomass-Derived 5-Hydroxymethylfurfural and Derivatives as Renewable Starting Materials Chacón-Huete F; Messina C; Cigana B; Forgione P; 35652539
CHEMBIOCHEM
6 Screening of novel fungal Carbohydrate Esterase family 1 enzymes identifies three novel dual feruloyl/acetyl xylan esterases Dilokpimol A; Verkerk B; Li X; Bellemare A; Lavallee M; Frommhagen M; Nørmølle Underlin E; Kabel MA; Powlowski J; Tsang A; de Vries RP; 35187647
CSFG
7 Species compositions mediate biomass conservation: the case of lake fish communities Arranz I; Fournier B; Lester NP; Shuter BJ; Peres-Neto PR; 34905222
BIOLOGY
8 Use of biomass-derived adsorbents for the removal of petroleum pollutants from water: a mini-review Vahabisani A; An C; 34804763
ENCS
9 The relationship between eDNA particle concentration and organism abundance in nature is strengthened by allometric scaling. Yates MC, Glaser D, Post J, Cristescu ME, Fraser DJ, Derry AM 32638451
CONCORDIA
10 Penicillium subrubescens adapts its enzyme production to the composition of plant biomass. Dilokpimol A, Peng M, Di Falco M, Chin A Woeng T, Hegi RMW, Granchi Z, Tsang A, Hildén KS, Mäkelä MR, de Vries RP 32408196
CSFG
11 Evidence for ligninolytic activity of the ascomycete fungus Podospora anserina. van Erven G, Kleijn AF, Patyshakuliyeva A, Di Falco M, Tsang A, de Vries RP, van Berkel WJH, Kabel MA 32322305
CSFG
12 Enzymes of early-diverging, zoosporic fungi. Lange L, Barrett K, Pilgaard B, Gleason F, Tsang A 31309267
CSFG
13 Pilot-scale application of a single-stage hybrid airlift BioCAST bioreactor for treatment of ammonium from nitrite-limited wastewater by a partial nitrification/anammox process. Saborimanesh N, Walsh D, Yerushalmi L, Arriagada EC, Mulligan CN 31267396
BIOLOGY
14 Transcriptome and exoproteome analysis of utilization of plant-derived biomass by Myceliophthora thermophila. Kolbusz MA, Di Falco M, Ishmael N, Marqueteau S, Moisan MC, Baptista CDS, Powlowski J, Tsang A 24881579
BIOLOGY
15 Closely related fungi employ diverse enzymatic strategies to degrade plant biomass. Benoit I, Culleton H, Zhou M, DiFalco M, Aguilar-Osorio G, Battaglia E, Bouzid O, Brouwer CPJM, El-Bushari HBO, Coutinho PM, Gruben BS, Hildén KS, Houbraken J, Barboza LAJ, Levasseur A, Majoor E, Mäkelä MR, Narang HM, Trejo-Aguilar B, van den Brink J, vanKuyk PA, Wiebenga A, McKie V, McCleary B, Tsang A, Henrissat B, de Vries RP 26236396
CSFG
16 Expression-based clustering of CAZyme-encoding genes of Aspergillus niger. Gruben BS, Mäkelä MR, Kowalczyk JE, Zhou M, Benoit-Gelber I, De Vries RP 29169319
CSFG
17 Genomic and exoproteomic diversity in plant biomass degradation approaches among Aspergilli Mäkelä MR; DiFalco M; McDonnell E; Nguyen TTM; Wiebenga A; Hildén K; Peng M; Grigoriev IV; Tsang A; de Vries RP; 30487660
CSFG
18 The presence of trace components significantly broadens the molecular response of Aspergillus niger to guar gum. Coconi Linares N, Di Falco M, Benoit-Gelber I, Gruben BS, Peng M, Tsang A, Mäkelä MR, de Vries RP 30797054
CSFG

 

Title:Penicillium subrubescens adapts its enzyme production to the composition of plant biomass.
Authors:Dilokpimol APeng MDi Falco MChin A Woeng THegi RMWGranchi ZTsang AHildén KSMäkelä MRde Vries RP
Link:https://www.ncbi.nlm.nih.gov/pubmed/32408196?dopt=Abstract
DOI:10.1016/j.biortech.2020.123477
Publication:Bioresource technology
Keywords:CAZymeExoproteomePenicillium subrubescensPlant biomassTranscriptome
PMID:32408196 Category:Bioresour Technol Date Added:2020-05-15
Dept Affiliation: CSFG
1 Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.
2 Centre for Structural and Functional Genomics, Concordia University, 7141 Sherbrooke West, H4B 1R6 Montreal, Quebec, Canada.
3 GenomeScan B.V, Plesmanlaan 1/D, 2333 BZ Leiden, The Netherlands.
4 Department of Microbiology, University of Helsinki, Viikinkaari 9, Helsinki, Finland.
5 Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands. Electronic address: r.devries@wi.knaw.nl.

Description:

Penicillium subrubescens adapts its enzyme production to the composition of plant biomass.

Bioresour Technol. 2020 May 05;311:123477

Authors: Dilokpimol A, Peng M, Di Falco M, Chin A Woeng T, Hegi RMW, Granchi Z, Tsang A, Hildén KS, Mäkelä MR, de Vries RP

Abstract

Penicillium subrubescens is able to degrade a broad range of plant biomass and it has an expanded set of Carbohydrate Active enzyme (CAZyme)-encoding genes in comparison to other Penicillium species. Here we used exoproteome and transcriptome analysis to demonstrate the versatile plant biomass degradation mechanism by P. subrubescens during growth on wheat bran and sugar beet pulp. On wheat bran P. subrubescens degraded xylan main chain and side residues from Day 2 of cultivation, whereas it started to degrade side chains of pectin in sugar beet pulp prior to attacking the main chain on Day 3. In addition, on Day 3 the cellulolytic enzymes were highly increased. Our results confirm that P. subrubescens adapts its enzyme production to the available plant biomass and is a promising new fungal cell factory for the production of CAZymes.

PMID: 32408196 [PubMed - as supplied by publisher]





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