Keyword search (4,163 papers available)

"Xiao Y" Authored Publications:

Title Authors PubMed ID
1 Towards user-centered interactive medical image segmentation in VR with an assistive AI agent Spiegler P; Harirpoush A; Xiao Y; 41509996
ENCS
2 Surgical hyperspectral imaging: a systematic review Ali HM; Xiao Y; Kersten-Oertel M; 40824764
ENCS
3 MedCLIP-SAMv2: Towards universal text-driven medical image segmentation Koleilat T; Asgariandehkordi H; Rivaz H; Xiao Y; 40779830
ENCS
4 Joint enhancement of automatic chest x-ray diagnosis and radiological gaze prediction with multistage cooperative learning Qiu Z; Rivaz H; Xiao Y; 40665596
ENCS
5 CASCADE-FSL: Few-shot learning for collateral evaluation in ischemic stroke Aktar M; Tampieri D; Xiao Y; Rivaz H; Kersten-Oertel M; 40250214
ENCS
6 A database of magnetic resonance imaging-transcranial ultrasound co-registration Alizadeh M; Collins DL; Kersten-Oertel M; Xiao Y; 39920905
SOH
7 PreVISE: an efficient virtual reality system for SEEG surgical planning Spiegler P; Abdelsalam H; Hellum O; Hadjinicolaou A; Weil AG; Xiao Y; 39735694
ENCS
8 Virtual reality-based preoperative planning for optimized trocar placement in thoracic surgery: A preliminary study Harirpoush A; Rakovich G; Kersten-Oertel M; Xiao Y; 39720764
ENCS
9 Design, manufacturing, and multi-modal imaging of stereolithography 3D printed flexible intracranial aneurysm phantoms Yalman A; Jafari A; Léger É; Mastroianni MA; Teimouri K; Savoji H; Collins DL; Kadem L; Xiao Y; 39546636
BIOLOGY
10 Expanding a Behavioral View on Digital Health Access: Drivers and Strategies to Promote Equity Kepper MM; Fowler LA; Kusters IS; Davis JW; Baqer M; Sagui-Henson S; Xiao Y; Tarfa A; Yi JC; Gibson B; Heron KE; Alberts NM; Burgermaster M; Njie-Carr VP; Klesges LM; 39088246
PSYCHOLOGY
11 Open access segmentations of intraoperative brain tumor ultrasound images Behboodi B; Carton FX; Chabanas M; de Ribaupierre S; Solheim O; Munkvold BKR; Rivaz H; Xiao Y; Reinertsen I; 39047165
SOH
12 Virtual and Augmented Reality in Ventriculostomy: A Systematic Review Alizadeh M; Xiao Y; Kersten-Oertel M; 38823448
ENCS
13 SCANED: Siamese collateral assessment network for evaluation of collaterals from ischemic damage Aktar M; Xiao Y; Tehrani AKZ; Tampieri D; Rivaz H; Kersten-Oertel M; 38364600
ENCS
14 PILLAR: ParaspInaL muscLe segmentAtion pRoject - a comprehensive online resource to guide manual segmentation of paraspinal muscles from magnetic resonance imaging Anstruther M; Rossini B; Zhang T; Liang T; Xiao Y; Fortin M; 37996857
SOH
15 A population-averaged structural connectomic brain atlas dataset from 422 HCP-aging subjects Xiao Y; Gilmore G; Kai J; Lau JC; Peters T; Khan AR; 37663773
ENCS
16 A dataset of multi-contrast unbiased average MRI templates of a Parkinson's disease population Madge V; Fonov VS; Xiao Y; Zou L; Jackson C; Postuma RB; Dagher A; Fon EA; Collins DL; 37213552
IMAGING
17 Deep learning for collateral evaluation in ischemic stroke with imbalanced data Aktar M; Reyes J; Tampieri D; Rivaz H; Xiao Y; Kersten-Oertel M; 36635594
ENCS
18 Robust landmark-based brain shift correction with a Siamese neural network in ultrasound-guided brain tumor resection Pirhadi A; Salari S; Ahmad MO; Rivaz H; Xiao Y; 36306056
PERFORM
19 DiffeoRaptor: diffeomorphic inter-modal image registration using RaPTOR Masoumi N; Rivaz H; Ahmad MO; Xiao Y; 36173541
ENCS
20 Statistical morphological analysis reveals characteristic paraspinal muscle asymmetry in unilateral lumbar disc herniation Xiao Y; Fortin M; Ahn J; Rivaz H; Peters TM; Battié MC; 34341427
PERFORM
21 Characterizing white matter alterations subject to clinical laterality in drug-naïve de novo Parkinson's disease Xiao Y; Peters TM; Khan AR; 34106502
PERFORM
22 Multimodal 3D ultrasound and CT in image-guided spinal surgery: public database and new registration algorithms Masoumi N; Belasso CJ; Ahmad MO; Benali H; Xiao Y; Rivaz H; 33683544
PERFORM
23 Automatic collateral circulation scoring in ischemic stroke using 4D CT angiography with low-rank and sparse matrix decomposition. Aktar M, Tampieri D, Rivaz H, Kersten-Oertel M, Xiao Y 32662055
ENCS
24 REtroSpective Evaluation of Cerebral Tumors (RESECT): A clinical database of pre-operative MRI and intra-operative ultrasound in low-grade glioma surgeries. Xiao Y, Fortin M, Unsgård G, Rivaz H, Reinertsen I 28391601
PERFORM
25 A dataset of multi-contrast population-averaged brain MRI atlases of a Parkinson׳s disease cohort. Xiao Y, Fonov V, Chakravarty MM, Beriault S, Al Subaie F, Sadikot A, Pike GB, Bertrand G, Collins DL 28491942
PERFORM
26 Multimodal 18F-Fluciclovine PET/MRI and Ultrasound-Guided Neurosurgery of an Anaplastic Oligodendroglioma. Karlberg A, Berntsen EM, Johansen H, Myrthue M, Skjulsvik AJ, Reinertsen I, Esmaeili M, Dai HY, Xiao Y, Rivaz H, Borghammer P, Solheim O, Eikenes L 28844925
PERFORM
27 Nonlinear deformation of tractography in ultrasound-guided low-grade gliomas resection. Xiao Y, Eikenes L, Reinertsen I, Rivaz H 29299739
PERFORM
28 Intra-operative Video Characterization of Carotid Artery Pulsation Patterns in Case Series with Post-endarterectomy Hypertension and Hyperperfusion Syndrome. Xiao Y, Rivaz H, Kasuya H, Yokosako S, Mindru C, Teitelbaum J, Sirhan D, Sinclair D, Angle M, Lo BWY 29322480
PERFORM
29 Correction to: Nonlinear deformation of tractography in ultrasound-guided low-grade gliomas resection. Xiao Y, Eikenes L, Reinertsen I, Rivaz H 29392538
PERFORM
30 High-Dynamic-Range Ultrasound: Application for Imaging Tendon Pathology. Xiao Y, Boily M, Hashemi HS, Rivaz H 29628224
PERFORM
31 Population-averaged MRI atlases for automated image processing and assessments of lumbar paraspinal muscles. Xiao Y, Fortin M, Battié MC, Rivaz H 30051147
PERFORM
32 ARENA: Inter-modality affine registration using evolutionary strategy. Masoumi N, Xiao Y, Rivaz H 30535826
PERFORM

 

Title:ARENA: Inter-modality affine registration using evolutionary strategy.
Authors:Masoumi NXiao YRivaz H
Link:https://www.ncbi.nlm.nih.gov/pubmed/30535826?dopt=Abstract
DOI:10.1007/s11548-018-1897-1
Publication:International journal of computer assisted radiology and surgery
Keywords:Affine TransformationCMA-ESCorrelation ratioImage registrationRESECT databasemTRE
PMID:30535826 Category:Int J Comput Assist Radiol Surg Date Added:2019-04-15
Dept Affiliation: PERFORM
1 PERFORM Centre, Concordia University, Montreal, Canada. n_masoum@encs.concordia.ca.
2 Department of Electrical and Computer Engineering, Concordia University, Montreal, Canada. n_masoum@encs.concordia.ca.
3 Robarts Research Institute, Western University, London, Canada.
4 PERFORM Centre, Concordia University, Montreal, Canada.
5 Department of Electrical and Computer Engineering, Concordia University, Montreal, Canada.

Description:

ARENA: Inter-modality affine registration using evolutionary strategy.

Int J Comput Assist Radiol Surg. 2019 Mar;14(3):441-450

Authors: Masoumi N, Xiao Y, Rivaz H

Abstract

PURPOSE: Image fusion of different imaging modalities renders valuable information to clinicians. In this paper, we proposed an automatic multimodal registration method to register intra-operative ultrasound images (US) to preoperative magnetic resonance images (MRI) in the context of image-guided neurosurgery.

METHODS: We employed refined correlation ratio as a similarity metric for our intensity-based image registration method. We deem MRI as the fixed image ([Formula: see text]) and US as the moving image ([Formula: see text]) and then transform [Formula: see text] to align with [Formula: see text]. We utilized the covariance matrix adaptation evolutionary strategy to find the optimal affine transformation in registration of [Formula: see text] to [Formula: see text].

RESULTS: We applied our method on the publicly available retrospective evaluation of cerebral tumors (RESECT) database and Montreal Neurological Institute's brain images of tumors for evaluation (BITE) database. We validated the results qualitatively and quantitatively. Qualitative validation is conducted (by the three authors) through overlaying pre- and post-registration US and MRI to allow visual assessment of the alignment. Quantitative validation is performed by utilizing the corresponding landmarks in the databases for the preoperative MRI and the intra-operative US. Average mean target registration error (mTRE) has been reduced from [Formula: see text] to [Formula: see text] in 22 patients in the RESECT database and from [Formula: see text] to [Formula: see text] in the BITE database. A nonparametric statistical analysis performed using the Wilcoxon rank sum test shows that there is a significant difference between pre- and post-registration mTREs with a p value of [Formula: see text] for the RESECT database and [Formula: see text] for the BITE database.

CONCLUSIONS: The proposed fully automatic registration method significantly improved the alignment of MRI and US images and can therefore be used to reduce the misalignment of US and MRI caused by brain shift, calibration errors, and patient to MRI transformation matrix.

PMID: 30535826 [PubMed - in process]





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