Keyword search (4,163 papers available)

"Xiao Y" Authored Publications:

Title Authors PubMed ID
1 Towards user-centered interactive medical image segmentation in VR with an assistive AI agent Spiegler P; Harirpoush A; Xiao Y; 41509996
ENCS
2 Surgical hyperspectral imaging: a systematic review Ali HM; Xiao Y; Kersten-Oertel M; 40824764
ENCS
3 MedCLIP-SAMv2: Towards universal text-driven medical image segmentation Koleilat T; Asgariandehkordi H; Rivaz H; Xiao Y; 40779830
ENCS
4 Joint enhancement of automatic chest x-ray diagnosis and radiological gaze prediction with multistage cooperative learning Qiu Z; Rivaz H; Xiao Y; 40665596
ENCS
5 CASCADE-FSL: Few-shot learning for collateral evaluation in ischemic stroke Aktar M; Tampieri D; Xiao Y; Rivaz H; Kersten-Oertel M; 40250214
ENCS
6 A database of magnetic resonance imaging-transcranial ultrasound co-registration Alizadeh M; Collins DL; Kersten-Oertel M; Xiao Y; 39920905
SOH
7 PreVISE: an efficient virtual reality system for SEEG surgical planning Spiegler P; Abdelsalam H; Hellum O; Hadjinicolaou A; Weil AG; Xiao Y; 39735694
ENCS
8 Virtual reality-based preoperative planning for optimized trocar placement in thoracic surgery: A preliminary study Harirpoush A; Rakovich G; Kersten-Oertel M; Xiao Y; 39720764
ENCS
9 Design, manufacturing, and multi-modal imaging of stereolithography 3D printed flexible intracranial aneurysm phantoms Yalman A; Jafari A; Léger É; Mastroianni MA; Teimouri K; Savoji H; Collins DL; Kadem L; Xiao Y; 39546636
BIOLOGY
10 Expanding a Behavioral View on Digital Health Access: Drivers and Strategies to Promote Equity Kepper MM; Fowler LA; Kusters IS; Davis JW; Baqer M; Sagui-Henson S; Xiao Y; Tarfa A; Yi JC; Gibson B; Heron KE; Alberts NM; Burgermaster M; Njie-Carr VP; Klesges LM; 39088246
PSYCHOLOGY
11 Open access segmentations of intraoperative brain tumor ultrasound images Behboodi B; Carton FX; Chabanas M; de Ribaupierre S; Solheim O; Munkvold BKR; Rivaz H; Xiao Y; Reinertsen I; 39047165
SOH
12 Virtual and Augmented Reality in Ventriculostomy: A Systematic Review Alizadeh M; Xiao Y; Kersten-Oertel M; 38823448
ENCS
13 SCANED: Siamese collateral assessment network for evaluation of collaterals from ischemic damage Aktar M; Xiao Y; Tehrani AKZ; Tampieri D; Rivaz H; Kersten-Oertel M; 38364600
ENCS
14 PILLAR: ParaspInaL muscLe segmentAtion pRoject - a comprehensive online resource to guide manual segmentation of paraspinal muscles from magnetic resonance imaging Anstruther M; Rossini B; Zhang T; Liang T; Xiao Y; Fortin M; 37996857
SOH
15 A population-averaged structural connectomic brain atlas dataset from 422 HCP-aging subjects Xiao Y; Gilmore G; Kai J; Lau JC; Peters T; Khan AR; 37663773
ENCS
16 A dataset of multi-contrast unbiased average MRI templates of a Parkinson's disease population Madge V; Fonov VS; Xiao Y; Zou L; Jackson C; Postuma RB; Dagher A; Fon EA; Collins DL; 37213552
IMAGING
17 Deep learning for collateral evaluation in ischemic stroke with imbalanced data Aktar M; Reyes J; Tampieri D; Rivaz H; Xiao Y; Kersten-Oertel M; 36635594
ENCS
18 Robust landmark-based brain shift correction with a Siamese neural network in ultrasound-guided brain tumor resection Pirhadi A; Salari S; Ahmad MO; Rivaz H; Xiao Y; 36306056
PERFORM
19 DiffeoRaptor: diffeomorphic inter-modal image registration using RaPTOR Masoumi N; Rivaz H; Ahmad MO; Xiao Y; 36173541
ENCS
20 Statistical morphological analysis reveals characteristic paraspinal muscle asymmetry in unilateral lumbar disc herniation Xiao Y; Fortin M; Ahn J; Rivaz H; Peters TM; Battié MC; 34341427
PERFORM
21 Characterizing white matter alterations subject to clinical laterality in drug-naïve de novo Parkinson's disease Xiao Y; Peters TM; Khan AR; 34106502
PERFORM
22 Multimodal 3D ultrasound and CT in image-guided spinal surgery: public database and new registration algorithms Masoumi N; Belasso CJ; Ahmad MO; Benali H; Xiao Y; Rivaz H; 33683544
PERFORM
23 Automatic collateral circulation scoring in ischemic stroke using 4D CT angiography with low-rank and sparse matrix decomposition. Aktar M, Tampieri D, Rivaz H, Kersten-Oertel M, Xiao Y 32662055
ENCS
24 REtroSpective Evaluation of Cerebral Tumors (RESECT): A clinical database of pre-operative MRI and intra-operative ultrasound in low-grade glioma surgeries. Xiao Y, Fortin M, Unsgård G, Rivaz H, Reinertsen I 28391601
PERFORM
25 A dataset of multi-contrast population-averaged brain MRI atlases of a Parkinson׳s disease cohort. Xiao Y, Fonov V, Chakravarty MM, Beriault S, Al Subaie F, Sadikot A, Pike GB, Bertrand G, Collins DL 28491942
PERFORM
26 Multimodal 18F-Fluciclovine PET/MRI and Ultrasound-Guided Neurosurgery of an Anaplastic Oligodendroglioma. Karlberg A, Berntsen EM, Johansen H, Myrthue M, Skjulsvik AJ, Reinertsen I, Esmaeili M, Dai HY, Xiao Y, Rivaz H, Borghammer P, Solheim O, Eikenes L 28844925
PERFORM
27 Nonlinear deformation of tractography in ultrasound-guided low-grade gliomas resection. Xiao Y, Eikenes L, Reinertsen I, Rivaz H 29299739
PERFORM
28 Intra-operative Video Characterization of Carotid Artery Pulsation Patterns in Case Series with Post-endarterectomy Hypertension and Hyperperfusion Syndrome. Xiao Y, Rivaz H, Kasuya H, Yokosako S, Mindru C, Teitelbaum J, Sirhan D, Sinclair D, Angle M, Lo BWY 29322480
PERFORM
29 Correction to: Nonlinear deformation of tractography in ultrasound-guided low-grade gliomas resection. Xiao Y, Eikenes L, Reinertsen I, Rivaz H 29392538
PERFORM
30 High-Dynamic-Range Ultrasound: Application for Imaging Tendon Pathology. Xiao Y, Boily M, Hashemi HS, Rivaz H 29628224
PERFORM
31 Population-averaged MRI atlases for automated image processing and assessments of lumbar paraspinal muscles. Xiao Y, Fortin M, Battié MC, Rivaz H 30051147
PERFORM
32 ARENA: Inter-modality affine registration using evolutionary strategy. Masoumi N, Xiao Y, Rivaz H 30535826
PERFORM

 

Title:PILLAR: ParaspInaL muscLe segmentAtion pRoject - a comprehensive online resource to guide manual segmentation of paraspinal muscles from magnetic resonance imaging
Authors:Anstruther MRossini BZhang TLiang TXiao YFortin M
Link:https://pubmed.ncbi.nlm.nih.gov/37996857/
DOI:10.1186/s12891-023-07029-x
Publication:BMC musculoskeletal disorders
Keywords:Fat infiltrationLow back painLumbar spineMagnetic resonance imagingManual segmentation
PMID:37996857 Category: Date Added:2023-11-24
Dept Affiliation: SOH
1 Department Health Kinesiology and Applied Physiology, Concordia University, 7141 Sherbrooke Street W, SP-165.29, Montreal, QC, H4B 1R6, Canada.
2 Department of Computer Science and Software Engineering, Concordia University, Montreal, QC, Canada.
3 School of Health, Concordia University, Montreal, QC, Canada.
4 Department Health Kinesiology and Applied Physiology, Concordia University, 7141 Sherbrooke Street W, SP-165.29, Montreal, QC, H4B 1R6, Canada. maryse.fortin@concordia.ca.
5 School of Health, Concordia University, Montreal, QC, Canada. maryse.fortin@concordia.ca.
6 Centre de Recherche Interdisciplinaire en Réadaptation (CRIR), Montreal, QC, Canada. maryse.fortin@concordia.ca.

Description:

Background: There is an increasing interest in assessing paraspinal morphology and composition in relation to low back pain (LBP). However, variations in methods and segmentation protocols contribute to the inconsistent findings in the literature. We present an on-line resource, the ParaspInaL muscLe segmentAtion pRoject (PILLAR, https://projectpillar.github.io/ ), to provide a detailed description and visual guide of a segmentation protocol by using the publicly available ITK-SNAP software and discuss related challenges when performing paraspinal lumbar muscles segmentations from magnetic resonance imaging (MRI).

Methods: T2-weighted and corresponding fat-water IDEAL axial MRI from 3 males and 3 females (2 chronic LBP and 1 control for each sex) were used to demonstrate our segmentation protocol for each lumbar paraspinal muscle (erector spinae, lumbar multifidus, quadratus lumborum and psoas) and lumbar spinal level (L1-L5).

Results: Proper segmentation requires an understanding of the anatomy of paraspinal lumbar muscles and the variations in paraspinal muscle morphology and composition due to age, sex, and the presence of LBP or related spinal pathologies. Other challenges in segmentation includes the presence and variations of intramuscular and epimuscular fat, and side-to-side asymmetry.

Conclusion: The growing interest to assess the lumbar musculature and its role in the development and recurrence of LBP prompted the need for comprehensive and easy-to-follow resources, such as the PILLAR project to reduce inconsistencies in segmentation protocols. Standardizing manual muscle measurements from MRI will facilitate comparisons between studies while the field is progressively moving towards the automatization of paraspinal muscle measurements for large cohort studies.





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