Keyword search (4,163 papers available)

"Li J" Authored Publications:

Title Authors PubMed ID
1 Development of an evaporation-driven sampling system for the in situ long-term monitoring of heavy metals in surface water Li X; Ma H; Shi S; Tian X; Nie L; Han X; Sun J; Chen Z; Li J; Chen K; 41886856
ENCS
2 Clinical Manifestations Jobin B; Frasnelli J; Phillips NA; Boller B; 41443638
CONCORDIA
3 Intraspecific complexity in mercury contamination of two harvested fishes revealed by genetics: Food security and conservation implications Gibelli J; Michaelides S; Won H; Chamlian B; Bampfylde C; Maclean B; Giroux P; Gray QZ; Voyageur M; Jeon HB; Bouchard R; Fraser DJ; 41380599
BIOLOGY
4 Identification of five sleep-biopsychosocial profiles with specific neural signatures linking sleep variability with health, cognition, and lifestyle factors Perrault AA; Kebets V; Kuek NMY; Cross NE; Tesfaye R; Pomares FB; Li J; Chee MWL; Dang-Vu TT; Yeo BTT; 41056215
HKAP
5 The predictive role of olfactory identification on episodic memory and mild cognitive impairment: Results from the CIMA-Q cohort Jobin B; Phillips NA; Frasnelli J; Boller B; 40944318
PSYCHOLOGY
6 Exon junction complexes regulate osteoclast-induced bone resorption by influencing the NFATc1 m6A distribution through the "shield effect" Sun B; Yang JG; Wang Z; Wang Z; Feng W; Li X; Liu SN; Li J; Zhu YQ; Zhang P; Wang W; 40051055
ENCS
7 Genomics-Enabled Mixed-Stock Analysis Uncovers Intraspecific Migratory Complexity and Detects Unsampled Populations in a Harvested Fish Gibelli J; Won H; Michaelides S; Jeon HB; Fraser DJ; 39995301
BIOLOGY
8 Widespread admixture blurs population structure and confounds Lake Trout (Salvelinus namaycush) conservation even in the genomic era Bernos TA; Gibelli J; Michaelides S; Won H; Jeon HB; Marin K; Boguski DA; Janjua MY; Gallagher CP; Howland KL; Fraser DJ; 39730611
BIOLOGY
9 Sustainable and energy-saving hydrogen production via binder-free and in situ electrodeposited Ni-Mn-S nanowires on Ni-Cu 3-D substrates Barati Darband G; Iravani D; Zhang M; Maleki M; Huang S; Khoshfetrat SM; Andaveh R; Li J; 39655509
ENCS
10 Integrative approach to mitigate chromium toxicity in soil and enhance antioxidant activities in rice (Oryza sativa L.) using magnesium-iron nanocomposite and Staphylococcus aureus strains Ali MA; Sardar MF; Dar AA; Niaz M; Ali J; Wang Q; Zheng Y; Luo Y; Albasher G; Li F; 39190219
ENCS
11 A multidimensional investigation of sleep and biopsychosocial profiles with associated neural signatures Perrault AA; Kebets V; Kuek NMY; Cross NE; Tesfaye R; Pomares FB; Li J; Chee MWL; Dang-Vu TT; Yeo BTT; 38659875
HKAP
12 A multidimensional investigation of sleep and biopsychosocialprofiles with associated neural signatures Perrault AA; Kebets V; Kuek NMY; Cross NE; Tesfaye R; Pomares FB; Li J; Chee MWL; Dang-Vu TT; Thomas Yeo BT; 38559143
HKAP
13 Alternative Oxidase: From Molecule and Function to Future Inhibitors Li J; Yang S; Wu Y; Wang R; Liu Y; Liu J; Ye Z; Tang R; Whiteway M; Lv Q; Yan L; 38524433
BIOLOGY
14 Exosome-targeted delivery of METTL14 regulates NFATc1 m6A methylation levels to correct osteoclast-induced bone resorption Yang JG; Sun B; Wang Z; Li X; Gao JH; Qian JJ; Li J; Wei WJ; Zhang P; Wang W; 37957146
ENCS
15 Species-specific protein-protein interactions govern the humanization of the 20S proteasome in yeast Sultana S; Abdullah M; Li J; Hochstrasser M; Kachroo AH; 37364278
BIOLOGY
16 The Sugar Metabolic Model of Aspergillus niger Can Only Be Reliably Transferred to Fungi of Its Phylum Li J; Chroumpi T; Garrigues S; Kun RS; Meng J; Salazar-Cerezo S; Aguilar-Pontes MV; Zhang Y; Tejomurthula S; Lipzen A; Ng V; Clendinen CS; Tolic N; Grigoriev IV; Tsang A; Mäkelä MR; Snel B; Peng M; de Vries RP; 36547648
BIOLOGY
17 Transcriptional Profiling of the Candida albicans Response to the DNA Damage Agent Methyl Methanesulfonate Feng Y; Zhang Y; Li J; Omran RP; Whiteway M; Feng J; 35886903
BIOLOGY
18 Perfluoroalkyl and polyfluoroalkyl substances (PFASs) in groundwater: current understandings and challenges to overcome Zhao Z; Li J; Zhang X; Wang L; Wang J; Lin T; 35593984
CHEMBIOCHEM
19 The Effect of Stimulus Duration on the Nostril Localization of Eucalyptol. Frasnelli J, Gingras-Lessard F, Robert J, Steffener J 28334125
PERFORM
20 The eIF2α Kinase GCN2 Modulates Period and Rhythmicity of the Circadian Clock by Translational Control of Atf4. Pathak SS, Liu D, Li T, de Zavalia N, Zhu L, Li J, Karthikeyan R, Alain T, Liu AC, Storch KF, Kaufman RJ, Jin VX, Amir S, Sonenberg N, Cao R 31522764
CSBN
21 Objective Evaluation of Multiple Sclerosis Lesion Segmentation using a Data Management and Processing Infrastructure. Commowick O, Istace A, Kain M, Laurent B, Leray F, Simon M, Pop SC, Girard P, Améli R, Ferré JC, Kerbrat A, Tourdias T, Cervenansky F, Glatard T, Beaumont J, Doyle S, Forbes F, Knight J, Khademi A, Mahbod A, Wang C, McKinley R, Wagner F, Muschelli J, Sweeney E, Roura E, Lladó X, Santos MM, Santos WP, Silva-Filho AG, Tomas-Fernandez X, Urien H, Bloch I, Valverde S, Cabezas M, Vera-Olmos FJ, Malpica N, Guttmann C, Vukusic S, Edan G, Dojat M, Styner M, Warfield SK, Cotton F, Barillot C 30209345
ENCS

 

Title:Species-specific protein-protein interactions govern the humanization of the 20S proteasome in yeast
Authors:Sultana SAbdullah MLi JHochstrasser MKachroo AH
Link:https://pubmed.ncbi.nlm.nih.gov/37364278/
DOI:10.1093/genetics/iyad117
Publication:Genetics
Keywords:functional replaceability or replacement-complementhumanized yeastorthologyproteasome core assemblysuppressor screentrypsin-like activity
PMID:37364278 Category: Date Added:2023-06-26
Dept Affiliation: BIOLOGY

Description:

Yeast and humans share thousands of genes despite a billion years of evolutionary divergence. While many human genes can functionally replace their yeast counterparts, nearly half of the tested shared genes cannot. For example, most yeast proteasome subunits are "humanizable", except subunits comprising the ß-ring core, including ß2c (HsPSMB7, a constitutive proteasome subunit). We developed a high-throughput pipeline to humanize yeast proteasomes by generating a large library of Hsß2c mutants and screening them for complementation of a yeast ß2 (ScPup1) knockout. Variants capable of replacing ScPup1 included (1) those impacting local protein-protein interactions (PPIs), with most affecting interactions between the ß2c C-terminal tail and the adjacent ß3 subunit, and (2) those affecting ß2c proteolytic activity. Exchanging the full-length tail of human ß2c with that of ScPup1 enabled complementation. Moreover, wild-type human ß2c could replace yeast ß2 if human ß3 was also provided. Unexpectedly, yeast proteasomes bearing a catalytically inactive HsPSMB7-T44A variant that blocked precursor autoprocessing were viable, suggesting an intact propeptide stabilizes late assembly intermediates. In contrast, similar modifications in human ß2i (HsPSMB10), an immuno-proteasome subunit and the co-ortholog of yeast ß2, do not enable complementation in yeast, suggesting distinct interactions are involved in human immunoproteasome core assembly. Broadly, our data reveal roles for specific PPIs governing functional replaceability across vast evolutionary distances.





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