| Keyword search (4,163 papers available) | ![]() |
"Li J" Authored Publications:
| Title | Authors | PubMed ID | |
|---|---|---|---|
| 1 | Development of an evaporation-driven sampling system for the in situ long-term monitoring of heavy metals in surface water | Li X; Ma H; Shi S; Tian X; Nie L; Han X; Sun J; Chen Z; Li J; Chen K; | 41886856 ENCS |
| 2 | Clinical Manifestations | Jobin B; Frasnelli J; Phillips NA; Boller B; | 41443638 CONCORDIA |
| 3 | Intraspecific complexity in mercury contamination of two harvested fishes revealed by genetics: Food security and conservation implications | Gibelli J; Michaelides S; Won H; Chamlian B; Bampfylde C; Maclean B; Giroux P; Gray QZ; Voyageur M; Jeon HB; Bouchard R; Fraser DJ; | 41380599 BIOLOGY |
| 4 | Identification of five sleep-biopsychosocial profiles with specific neural signatures linking sleep variability with health, cognition, and lifestyle factors | Perrault AA; Kebets V; Kuek NMY; Cross NE; Tesfaye R; Pomares FB; Li J; Chee MWL; Dang-Vu TT; Yeo BTT; | 41056215 HKAP |
| 5 | The predictive role of olfactory identification on episodic memory and mild cognitive impairment: Results from the CIMA-Q cohort | Jobin B; Phillips NA; Frasnelli J; Boller B; | 40944318 PSYCHOLOGY |
| 6 | Exon junction complexes regulate osteoclast-induced bone resorption by influencing the NFATc1 m6A distribution through the "shield effect" | Sun B; Yang JG; Wang Z; Wang Z; Feng W; Li X; Liu SN; Li J; Zhu YQ; Zhang P; Wang W; | 40051055 ENCS |
| 7 | Genomics-Enabled Mixed-Stock Analysis Uncovers Intraspecific Migratory Complexity and Detects Unsampled Populations in a Harvested Fish | Gibelli J; Won H; Michaelides S; Jeon HB; Fraser DJ; | 39995301 BIOLOGY |
| 8 | Widespread admixture blurs population structure and confounds Lake Trout (Salvelinus namaycush) conservation even in the genomic era | Bernos TA; Gibelli J; Michaelides S; Won H; Jeon HB; Marin K; Boguski DA; Janjua MY; Gallagher CP; Howland KL; Fraser DJ; | 39730611 BIOLOGY |
| 9 | Sustainable and energy-saving hydrogen production via binder-free and in situ electrodeposited Ni-Mn-S nanowires on Ni-Cu 3-D substrates | Barati Darband G; Iravani D; Zhang M; Maleki M; Huang S; Khoshfetrat SM; Andaveh R; Li J; | 39655509 ENCS |
| 10 | Integrative approach to mitigate chromium toxicity in soil and enhance antioxidant activities in rice (Oryza sativa L.) using magnesium-iron nanocomposite and Staphylococcus aureus strains | Ali MA; Sardar MF; Dar AA; Niaz M; Ali J; Wang Q; Zheng Y; Luo Y; Albasher G; Li F; | 39190219 ENCS |
| 11 | A multidimensional investigation of sleep and biopsychosocial profiles with associated neural signatures | Perrault AA; Kebets V; Kuek NMY; Cross NE; Tesfaye R; Pomares FB; Li J; Chee MWL; Dang-Vu TT; Yeo BTT; | 38659875 HKAP |
| 12 | A multidimensional investigation of sleep and biopsychosocialprofiles with associated neural signatures | Perrault AA; Kebets V; Kuek NMY; Cross NE; Tesfaye R; Pomares FB; Li J; Chee MWL; Dang-Vu TT; Thomas Yeo BT; | 38559143 HKAP |
| 13 | Alternative Oxidase: From Molecule and Function to Future Inhibitors | Li J; Yang S; Wu Y; Wang R; Liu Y; Liu J; Ye Z; Tang R; Whiteway M; Lv Q; Yan L; | 38524433 BIOLOGY |
| 14 | Exosome-targeted delivery of METTL14 regulates NFATc1 m6A methylation levels to correct osteoclast-induced bone resorption | Yang JG; Sun B; Wang Z; Li X; Gao JH; Qian JJ; Li J; Wei WJ; Zhang P; Wang W; | 37957146 ENCS |
| 15 | Species-specific protein-protein interactions govern the humanization of the 20S proteasome in yeast | Sultana S; Abdullah M; Li J; Hochstrasser M; Kachroo AH; | 37364278 BIOLOGY |
| 16 | The Sugar Metabolic Model of Aspergillus niger Can Only Be Reliably Transferred to Fungi of Its Phylum | Li J; Chroumpi T; Garrigues S; Kun RS; Meng J; Salazar-Cerezo S; Aguilar-Pontes MV; Zhang Y; Tejomurthula S; Lipzen A; Ng V; Clendinen CS; Tolic N; Grigoriev IV; Tsang A; Mäkelä MR; Snel B; Peng M; de Vries RP; | 36547648 BIOLOGY |
| 17 | Transcriptional Profiling of the Candida albicans Response to the DNA Damage Agent Methyl Methanesulfonate | Feng Y; Zhang Y; Li J; Omran RP; Whiteway M; Feng J; | 35886903 BIOLOGY |
| 18 | Perfluoroalkyl and polyfluoroalkyl substances (PFASs) in groundwater: current understandings and challenges to overcome | Zhao Z; Li J; Zhang X; Wang L; Wang J; Lin T; | 35593984 CHEMBIOCHEM |
| 19 | The Effect of Stimulus Duration on the Nostril Localization of Eucalyptol. | Frasnelli J, Gingras-Lessard F, Robert J, Steffener J | 28334125 PERFORM |
| 20 | The eIF2α Kinase GCN2 Modulates Period and Rhythmicity of the Circadian Clock by Translational Control of Atf4. | Pathak SS, Liu D, Li T, de Zavalia N, Zhu L, Li J, Karthikeyan R, Alain T, Liu AC, Storch KF, Kaufman RJ, Jin VX, Amir S, Sonenberg N, Cao R | 31522764 CSBN |
| 21 | Objective Evaluation of Multiple Sclerosis Lesion Segmentation using a Data Management and Processing Infrastructure. | Commowick O, Istace A, Kain M, Laurent B, Leray F, Simon M, Pop SC, Girard P, Améli R, Ferré JC, Kerbrat A, Tourdias T, Cervenansky F, Glatard T, Beaumont J, Doyle S, Forbes F, Knight J, Khademi A, Mahbod A, Wang C, McKinley R, Wagner F, Muschelli J, Sweeney E, Roura E, Lladó X, Santos MM, Santos WP, Silva-Filho AG, Tomas-Fernandez X, Urien H, Bloch I, Valverde S, Cabezas M, Vera-Olmos FJ, Malpica N, Guttmann C, Vukusic S, Edan G, Dojat M, Styner M, Warfield SK, Cotton F, Barillot C | 30209345 ENCS |
| Title: | Species-specific protein-protein interactions govern the humanization of the 20S proteasome in yeast | ||||
| Authors: | Sultana S, Abdullah M, Li J, Hochstrasser M, Kachroo AH | ||||
| Link: | https://pubmed.ncbi.nlm.nih.gov/37364278/ | ||||
| DOI: | 10.1093/genetics/iyad117 | ||||
| Publication: | Genetics | ||||
| Keywords: | functional replaceability or replacement-complement; humanized yeast; orthology; proteasome core assembly; suppressor screen; trypsin-like activity; | ||||
| PMID: | 37364278 | Category: | Date Added: | 2023-06-26 | |
| Dept Affiliation: | BIOLOGY | ||||
Description: |
Yeast and humans share thousands of genes despite a billion years of evolutionary divergence. While many human genes can functionally replace their yeast counterparts, nearly half of the tested shared genes cannot. For example, most yeast proteasome subunits are "humanizable", except subunits comprising the ß-ring core, including ß2c (HsPSMB7, a constitutive proteasome subunit). We developed a high-throughput pipeline to humanize yeast proteasomes by generating a large library of Hsß2c mutants and screening them for complementation of a yeast ß2 (ScPup1) knockout. Variants capable of replacing ScPup1 included (1) those impacting local protein-protein interactions (PPIs), with most affecting interactions between the ß2c C-terminal tail and the adjacent ß3 subunit, and (2) those affecting ß2c proteolytic activity. Exchanging the full-length tail of human ß2c with that of ScPup1 enabled complementation. Moreover, wild-type human ß2c could replace yeast ß2 if human ß3 was also provided. Unexpectedly, yeast proteasomes bearing a catalytically inactive HsPSMB7-T44A variant that blocked precursor autoprocessing were viable, suggesting an intact propeptide stabilizes late assembly intermediates. In contrast, similar modifications in human ß2i (HsPSMB10), an immuno-proteasome subunit and the co-ortholog of yeast ß2, do not enable complementation in yeast, suggesting distinct interactions are involved in human immunoproteasome core assembly. Broadly, our data reveal roles for specific PPIs governing functional replaceability across vast evolutionary distances. |



