Keyword search (4,163 papers available)

"Collins DL" Authored Publications:

Title Authors PubMed ID
1 The PREVENT-AD cohort: Accelerating Alzheimer s disease research and treatment in Canada and beyond Villeneuve S; Poirier J; Breitner JCS; Tremblay-Mercier J; Remz J; Raoult JM; Yakoub Y; Gallego-Rudolf J; Qiu T; Fajardo Valdez A; Mohammediyan B; Javanray M; Metz A; Sanami S; Ourry V; Wearn A; Pastor-Bernier A; Edde M; Gonneaud J; Strikwerda-Brown C; Tardif CL; Gauthier CJ; Descoteaux M; Dadar M; Vachon-Presseau É; Baril AA; Ducharme S; Montembeault M; Geddes MR; Soucy JP; Rajah N; Laforce R; Bocti C; Davatzikos C; Bellec L; Rosa-Neto P; Baillet S; Evans AC; Collins DL; Chakravarty MM; Blennow K; Zetterbe 41020412
SOH
2 The PREVENT-AD cohort: accelerating Alzheimer s disease research and treatment in Canada and beyond Villeneuve S; Poirier J; Breitner JCS; Tremblay-Mercier J; Remz J; Raoult JM; Yakoub Y; Gallego-Rudolf J; Qiu T; Valdez AF; Mohammediyan B; Javanray M; Metz A; Sanami S; Ourry V; Wearn A; Pastor-Bernier A; Edde M; Gonneaud J; Strikwerda-Brown C; Tardif CL; Gauthier CJ; Descoteaux M; Dadar M; Vachon-Presseau É; Baril AA; Ducharme S; Montembeault M; Geddes MR; Soucy JP; Rajah N; Laforce R; Bocti C; Davatzikos C; Bellec L; Rosa-Neto P; Baillet S; Evans AC; Collins DL; Chakravarty MM; Blennow K; Zetterberg H; S 40778177
PSYCHOLOGY
3 Assessment of cognitive load in the context of neurosurgery Di Giovanni DA; Kersten-Oertel M; Drouin S; Collins DL; 40650801
PERFORM
4 A database of magnetic resonance imaging-transcranial ultrasound co-registration Alizadeh M; Collins DL; Kersten-Oertel M; Xiao Y; 39920905
SOH
5 Use of lecanemab and donanemab in the Canadian healthcare system: Evidence, challenges, and areas for future research Smith EE; Phillips NA; Feldman HH; Borrie M; Ganesh A; Henri-Bhargava A; Desmarais P; Frank A; Badhwar A; Barlow L; Bartha R; Best S; Bethell J; Bhangu J; Black SE; Bocti C; Bronskill SE; Burhan AM; Calon F; Camicioli R; Campbell B; Collins DL; Dadar M; DeMarco ML; Ducharme S; Duchesne S; Einstein G; Fisk JD; Gawryluk JR; Grossman L; Ismail Z; Itzhak I; Joshi M; Harrison A; Kroger E; Kumar S; Laforce R; Lanctot KL; Lau M; Lee L; Masellis M; Massoud F; Mitchell SB; Montero-Odasso M; Myers Barnett K; Nygaard HB; Pasternak SH; Peters J; Rajah MN; Robillard JM; Rockwood K; Rosa-Neto P; Seitz DP; Soucy JP; Trenaman SC; Wellington CL; Zadem A; Chertkow H; 39893139
CONCORDIA
6 Design, manufacturing, and multi-modal imaging of stereolithography 3D printed flexible intracranial aneurysm phantoms Yalman A; Jafari A; Léger É; Mastroianni MA; Teimouri K; Savoji H; Collins DL; Kadem L; Xiao Y; 39546636
BIOLOGY
7 A dataset of multi-contrast unbiased average MRI templates of a Parkinson's disease population Madge V; Fonov VS; Xiao Y; Zou L; Jackson C; Postuma RB; Dagher A; Fon EA; Collins DL; 37213552
IMAGING
8 The BigBrainWarp toolbox for integration of BigBrain 3D histology with multimodal neuroimaging Paquola C; Royer J; Lewis LB; Lepage C; Glatard T; Wagstyl K; DeKraker J; Toussaint PJ; Valk SL; Collins DL; Khan A; Amunts K; Evans AC; Dickscheid T; Bernhardt BC; 34431476
IMAGING
9 MARIN: an open-source mobile augmented reality interactive neuronavigation system. Léger É; Reyes J; Drouin S; Popa T; Hall JA; Collins DL; Kersten-Oertel M; 32323206
PERFORM
10 Cyberinfrastructure for Open Science at the Montreal Neurological Institute. Das S, Glatard T, Rogers C, Saigle J, Paiva S, MacIntyre L, Safi-Harab M, Rousseau ME, Stirling J, Khalili-Mahani N, MacFarlane D, Kostopoulos P, Rioux P, Madjar C, Lecours-Boucher X, Vanamala S, Adalat R, Mohaddes Z, Fonov VS, Milot S, Leppert I, Degroot C, Durcan TM, Campbell T, Moreau J, Dagher A, Collins DL, Karamchandani J, Bar-Or A, Fon EA, Hoge R, Baillet S, Rouleau G, Evans AC 28111547
IMAGING
11 Dehydroepiandrosterone impacts working memory by shaping cortico-hippocampal structural covariance during development. Nguyen TV, Wu M, Lew J, Albaugh MD, Botteron KN, Hudziak JJ, Fonov VS, Collins DL, Campbell BC, Booij L, Herba C, Monnier P, Ducharme S, McCracken JT 28946055
PSYCHOLOGY
12 Cognitive load associations when utilizing auditory display within image-guided neurosurgery. Plazak J, DiGiovanni DA, Collins DL, Kersten-Oertel M 30997635
ENCS
13 Quantifying attention shifts in augmented reality image-guided neurosurgery. Léger É, Drouin S, Collins DL, Popa T, Kersten-Oertel M 29184663
PERFORM
14 Structural Brain Alterations Associated with Rapid Eye Movement Sleep Behavior Disorder in Parkinson's Disease. Boucetta S, Salimi A, Dadar M, Jones BE, Collins DL, Dang-Vu TT 27245317
PERFORM
15 Deformable registration of preoperative MR, pre-resection ultrasound, and post-resection ultrasound images of neurosurgery. Rivaz H, Collins DL 25373447
PERFORM
16 A dataset of multi-contrast population-averaged brain MRI atlases of a Parkinson׳s disease cohort. Xiao Y, Fonov V, Chakravarty MM, Beriault S, Al Subaie F, Sadikot A, Pike GB, Bertrand G, Collins DL 28491942
PERFORM
17 Combining intraoperative ultrasound brain shift correction and augmented reality visualizations: a pilot study of eight cases. Gerard IJ, Kersten-Oertel M, Drouin S, Hall JA, Petrecca K, De Nigris D, Di Giovanni DA, Arbel T, Collins DL 29392162
PERFORM
18 Gesture-based registration correction using a mobile augmented reality image-guided neurosurgery system. Léger É, Reyes J, Drouin S, Collins DL, Popa T, Kersten-Oertel M 30800320
PERFORM

 

Title:A database of magnetic resonance imaging-transcranial ultrasound co-registration
Authors:Alizadeh MCollins DLKersten-Oertel MXiao Y
Link:https://pubmed.ncbi.nlm.nih.gov/39920905/
DOI:10.1002/mp.17666
Publication:Medical physics
Keywords:MRImulti‐modal image registrationtranscranial ultrasound
PMID:39920905 Category: Date Added:2025-02-08
Dept Affiliation: SOH
1 Department of Computer Science and Software Engineering, Concordia University, Montreal, Canada.
2 McConnell Brain Imaging Centre, Montreal Neurological Institute, McGill University, Montreal, Canada.
3 Department of Biomedical Engineering, McGill University, Montreal, Canada.
4 Department of Neurology and Neurosurgery, McGill University, Montreal, Canada.
5 School of Health, Concordia University, Montreal, Canada.

Description:

Purpose: As a portable and cost-effective imaging modality with better accessibility than Magnetic Resonance Imaging (MRI), transcranial sonography (TCS) has demonstrated its flexibility and potential utility in various clinical diagnostic applications, including Parkinson's disease and cerebrovascular conditions. To better understand the information in TCS for data analysis and acquisition, MRI can provide guidance for efficient imaging with neuronavigation systems and the confirmation of disease-related abnormality. In these cases, MRI-TCS co-registration is crucial, but relevant public databases are scarce to help develop the related algorithms and software systems.

Acquisition and validation methods: This dataset comprises manually registered MRI and transcranial ultrasound volumes from eight healthy subjects. Three raters manually registered each subject's scans, based on visual inspection of image feature correspondence. Average transformation matrices were computed from all raters' alignments for each subject. Inter- and intra-rater variability in the transformations conducted by raters are presented to validate the accuracy and consistency of manual registration. In addition, a population-averaged MRI brain vascular atlas is provided to facilitate the development of computer-assisted TCS acquisition software.

Data format and usage notes: The dataset is provided in both NIFTI and MINC formats and is publicly available on the OSF data repository: https://osf.io/zdcjb/.

Potential applications: This dataset provides the first public resource for the development and assessment of MRI-TCS registration with manual ground truths, as well as resources for establishing neuronavigation software in data acquisition and analysis of TCS. These technical advancements could greatly boost TCS as an imaging tool for clinical applications in the diagnosis of neurological conditions such as Parkinson's disease and cerebrovascular disorders.





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