| Keyword search (4,163 papers available) | ![]() |
"fungi" Keyword-tagged Publications:
| Title | Authors | PubMed ID | |
|---|---|---|---|
| 1 | Season and city shape urban bioaerosol composition beyond vegetation and socioeconomic gradients | Poirier S; Rondeau-Leclaire J; Faticov M; Roy A; Lajeunesse G; Lucier JF; Tardif S; Kembel SW; Ziter C; Laprise C; Paquette A; Girard C; Laforest-Lapointe I; | 41785576 BIOLOGY |
| 2 | Contrasting microbial assembly patterns in the woody endosphere of hybrid and non-hybrid em Populus /em trees | Grant KR; Kembel SW; Naik S; Dayanandan S; | 41089252 BIOLOGY |
| 3 | The Bug-Network (BugNet): A Global Experimental Network Testing the Effects of Invertebrate Herbivores and Fungal Pathogens on Plant Communities and Ecosystem Function in Open Ecosystems | Kempel A; Adamidis GC; Anadón JD; Atkinson J; Auge H; Avtzis D; Bachelot B; Bashirzadeh M; Bota JL; Classen A; Constantinou I; Crawley M; de Bellis T; Dostal P; Ebeling A; Eisenhauer N; Eldridge DJ; Encina G; Estrada C; Everingham S; Fanin N; Feng Y; Gaspar M; Gooriah L; Graff P; Montalván EG; Montalván PG; Hartke TR; Huang L; Jochum M; Kaljund K; Karmiris I; Koorem K; Korell L; Laine AL; le Provost G; Lessard JP; Liu M; Liu X; Liu Y; Llancabure J; Loïez S; Loydi A; Marrero H; Gockel S; Montoya A; Münzbergo | 41080499 ENCS |
| 4 | An examination of the quinic acid utilization genes in Aspergillus niger reveals the involvement of two pH-dependent permeases | Sgro M; Reid ID; Arentshorst M; Ram AFJ; Tsang A; | 40853219 GENOMICS |
| 5 | The temperate forest phyllosphere and rhizosphere microbiome: a case study of sugar maple | Enea M; Beauregard J; De Bellis T; Faticov M; Laforest-Lapointe I; | 39881993 BIOLOGY |
| 6 | Functional analysis of the protocatechuate branch of the β-ketoadipate pathway in Aspergillus niger | Sgro M; Chow N; Olyaei F; Arentshorst M; Geoffrion N; Ram AFJ; Powlowski J; Tsang A; | 37399977 BIOLOGY |
| 7 | Identification of Genes Involved in the Degradation of Lignocellulose Using Comparative Transcriptomics | Gruninger RJ; Tsang A; McAllister TA; | 37149538 CSFG |
| 8 | Comparative Analysis of Enzyme Production Patterns of Lignocellulose Degradation of Two White Rot Fungi: Obba rivulosa and Gelatoporia subvermispora | Marinovíc M; Di Falco M; Aguilar Pontes MV; Gorzsás A; Tsang A; de Vries RP; Mäkelä MR; Hildén K; | 35892327 CSFG |
| 9 | Screening of novel fungal Carbohydrate Esterase family 1 enzymes identifies three novel dual feruloyl/acetyl xylan esterases | Dilokpimol A; Verkerk B; Li X; Bellemare A; Lavallee M; Frommhagen M; Nørmølle Underlin E; Kabel MA; Powlowski J; Tsang A; de Vries RP; | 35187647 CSFG |
| 10 | The Canadian Fungal Research Network: current challenges and future opportunities. | Horianopoulos LC, Gluck-Thaler E, Benoit Gelber I, Cowen LE, Geddes-McAlister J, Landry CR, Schwartz IS, Scott JA, Sellam A, Sheppard DC, Spribille T, Subramaniam R, Walker AK, Harris SD, Shapiro RS, Gerstein A | 32717148 BIOLOGY |
| 11 | Discovery and Expression of Thermostable LPMOs from Thermophilic Fungi for Producing Efficient Lignocellulolytic Enzyme Cocktails. | Agrawal D, Basotra N, Balan V, Tsang A, Chadha BS | 31792786 CSFG |
| 12 | Shared mycorrhizae but distinct communities of other root-associated microbes on co-occurring native and invasive maples. | DeBellis T, Kembel SW, Lessard JP | 31392089 BIOLOGY |
| 13 | Enzymes of early-diverging, zoosporic fungi. | Lange L, Barrett K, Pilgaard B, Gleason F, Tsang A | 31309267 CSFG |
| 14 | Mycothermus thermophilus gen. et comb. nov., a new home for the itinerant thermophile Scytalidium thermophilum (Torula thermophila). | Natvig DO, Taylor JW, Tsang A, Hutchinson MI, Powell AJ | 25550298 CSFG |
| 15 | Identification of Genes Involved in the Degradation of Lignocellulose Using Comparative Transcriptomics. | Gruninger RJ, Reid I, Forster RJ, Tsang A, McAllister TA | 28417376 CSFG |
| 16 | Isolation and Preparation of Extracellular Proteins from Lignocellulose Degrading Fungi for Comparative Proteomic Studies Using Mass Spectrometry | Robert J Gruninger | 28417377 CSFG |
| 17 | Discovery and characterization of family 39 glycoside hydrolases from rumen anaerobic fungi with polyspecific activity on rare arabinosyl substrates. | Jones DR, Uddin MS, Gruninger RJ, Pham TTM, Thomas D, Boraston AB, Briggs J, Pluvinage B, McAllister TA, Forster RJ, Tsang A, Selinger LB, Abbott DW | 28588026 CSFG |
| 18 | Saccharification efficiencies of multi-enzyme complexes produced by aerobic fungi. | Badhan A, Huang J, Wang Y, Abbott DW, Di Falco M, Tsang A, McAllister T | 29803771 CSFG |
| 19 | Introduction: Overview of Fungal Genomics. | de Vries RP, Grigoriev IV, Tsang A | 29876804 CSFG |
| 20 | Application of Transcriptomics to Compare the Carbohydrate Active Enzymes That Are Expressed by Diverse Genera of Anaerobic Fungi to Degrade Plant Cell Wall Carbohydrates. | Gruninger RJ, Nguyen TTM, Reid ID, Yanke JL, Wang P, Abbott DW, Tsang A, McAllister T | 30061875 CSFG |
| 21 | Thermostable xylanases from thermophilic fungi and bacteria: Current perspective. | Chadha BS, Kaur B, Basotra N, Tsang A, Pandey A | 30679061 CSFG |
| Title: | Comparative Analysis of Enzyme Production Patterns of Lignocellulose Degradation of Two White Rot Fungi: Obba rivulosa and Gelatoporia subvermispora | ||||
| Authors: | Marinovíc M, Di Falco M, Aguilar Pontes MV, Gorzsás A, Tsang A, de Vries RP, Mäkelä MR, Hildén K | ||||
| Link: | https://pubmed.ncbi.nlm.nih.gov/35892327/ | ||||
| DOI: | 10.3390/biom12081017 | ||||
| Publication: | Biomolecules | ||||
| Keywords: | CAZymes; Gelatoporia subvermispora; LC-MS/MS; Obba rivulosa; lignin biodegradation; proteome; white rot fungi; | ||||
| PMID: | 35892327 | Category: | Date Added: | 2022-07-27 | |
| Dept Affiliation: |
CSFG
1 Department of Microbiology, Faculty of Agriculture and Forestry, University of Helsinki, 00790 Helsinki, Finland. 2 Centre for Structural and Functional Genomics, Concordia University, Montréal, QC H4B 1R6, Canada. 3 Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands. 4 Department of Chemistry, Umeå University, 901 87 Umeå, Sweden. |
||||
Description: |
The unique ability of basidiomycete white rot fungi to degrade all components of plant cell walls makes them indispensable organisms in the global carbon cycle. In this study, we analyzed the proteomes of two closely related white rot fungi, Obba rivulosa and Gelatoporia subvermispora, during eight-week cultivation on solid spruce wood. Plant cell wall degrading carbohydrate-active enzymes (CAZymes) represented approximately 5% of the total proteins in both species. A core set of orthologous plant cell wall degrading CAZymes was shared between these species on spruce suggesting a conserved plant biomass degradation approach in this clade of basidiomycete fungi. However, differences in time-dependent production of plant cell wall degrading enzymes may be due to differences among initial growth rates of these species on solid spruce wood. The obtained results provide insight into specific enzymes and enzyme sets that are produced during the degradation of solid spruce wood in these fungi. These findings expand the knowledge on enzyme production in nature-mimicking conditions and may contribute to the exploitation of white rot fungi and their enzymes for biotechnological applications. |



