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PubMed Publications| Keyword search (4,163 papers available) |  |
"Das S" Authored Publications:
| Title | Authors | PubMed ID | |
|---|---|---|---|
| 1 | Basic Science and Pathogenesis | Borrie MJ; Phillips NA; Best S; Anastasiou-Ventura P; Aydogan T; Beaudoin C; Beuk J; Celotto I; Cole L; Das S; Fogarty J; Fouquet C; Gnassi L; Henri-Bellemare C; Pilon R; Sands J; Stirbu A; Truemner J; Chan S; Tucker A; Gajraj J; Bhangu J; Chertkow H; | 41435411 CONCORDIA |
| 2 | Impact of a national dementia research consortium: The Canadian Consortium on Neurodegeneration in Aging (CCNA) | Chertkow H; Phillips N; Rockwood K; Anderson N; Andrew MK; Bartha R; Beaudoin C; Bélanger N; Bellec P; Belleville S; Bergman H; Best S; Bethell J; Bherer L; Black S; Borrie M; Camicioli R; Carrier J; Cashman N; Chan S; Crowshoe L; Cuello C; Cynader M; Dang-Vu T; Das S; Dixon RA; Ducharme S; Einstein G; Evans AC; Fahnestock M; Feldman H; Ferland G; Finger E; Fisk JD; Fogarty J; Fon E; Gan-Or Z; Gauthier S; Greenwood C; Henri-Bellemare C; Herrmann N; Hogan DB; Hsiung R; Itzhak I; Jacklin K; Lanctôt K; Lim A; MacKenzie I; Masellis M; Maxwell C; McAiney C; McGilton K; McLaurin J; Mihailidis A; Mohades Z; Montero-Odasso M; Morgan D; Naglie G; Nygaard H; O' Connell M; Petersen R; Pilon R; Rajah MN; Rapoport M; Roach P; Robillard JM; Rogaeva E; Rosa-Neto P; Rylett J; Sadavoy J; St George-Hyslop P; Seitz D; Smith E; Stefanovic B; Vedel I; Walker JD; Wellington C; Whitehead V; Wittich W; | 39636028 HKAP |
| 3 | Comparative genomic analysis of thermophilic fungi reveals convergent evolutionary adaptations and gene losses | Steindorff AS; Aguilar-Pontes MV; Robinson AJ; Andreopoulos B; LaButti K; Kuo A; Mondo S; Riley R; Otillar R; Haridas S; Lipzen A; Grimwood J; Schmutz J; Clum A; Reid ID; Moisan MC; Butler G; Nguyen TTM; Dewar K; Conant G; Drula E; Henrissat B; Hansel C; Singer S; Hutchinson MI; de Vries RP; Natvig DO; Powell AJ; Tsang A; Grigoriev IV; | 39266695 CSFG |
| 4 | A chloromethyl-triazole fluorescent chemosensor for O6-methylguanine DNA methyltransferase | Ayan S; Rotaru AM; Kaye EG; Juneau G; Das S; Wilds CJ; Beharry AA; | 38502038 CHEMBIOCHEM |
| 5 | Data and Tools Integration in the Canadian Open Neuroscience Platform | Poline JB; Das S; Glatard T; Madjar C; Dickie EW; Lecours X; Beaudry T; Beck N; Behan B; Brown ST; Bujold D; Beauvais M; Caron B; Czech C; Dharsee M; Dugré M; Evans K; Gee T; Ippoliti G; Kiar G; Knoppers BM; Kuehn T; Le D; Lo D; Mazaheri M; MacFarlane D; Muja N; O' Brien EA; O' Callaghan L; Paiva S; Park P; Quesnel D; Rabelais H; Rioux P; Legault M; Tremblay-Mercier J; Rotenberg D; Stone J; Strauss T; Zaytseva K; Zhou J; Duchesne S; Khan AR; Hill S; Evans AC; | 37024500 ENCS |
| 6 | A Simulation Toolkit for Testing the Sensitivity and Accuracy of Corticometry Pipelines | OmidYeganeh M; Khalili-Mahani N; Bermudez P; Ross A; Lepage C; Vincent RD; Jeon S; Lewis LB; Das S; Zijdenbos AP; Rioux P; Adalat R; Van Eede MC; Evans AC; | 34381348 PERFORM |
| 7 | The Comprehensive Assessment of Neurodegeneration and Dementia: Canadian Cohort Study. | Chertkow H, Borrie M, Whitehead V, Black SE, Feldman HH, Gauthier S, Hogan DB, Masellis M, McGilton K, Rockwood K, Tierney MC, Andrew M, Hsiung GR, Camicioli R, Smith EE, Fogarty J, Lindsay J, Best S, Evans A, Das S, Mohaddes Z, Pilon R, Poirier J, Phillips NA, MacNamara E, Dixon RA, Duchesne S, MacKenzie I, Rylett RJ | 31309917 PSYCHOLOGY |
| 8 | Cyberinfrastructure for Open Science at the Montreal Neurological Institute. | Das S, Glatard T, Rogers C, Saigle J, Paiva S, MacIntyre L, Safi-Harab M, Rousseau ME, Stirling J, Khalili-Mahani N, MacFarlane D, Kostopoulos P, Rioux P, Madjar C, Lecours-Boucher X, Vanamala S, Adalat R, Mohaddes Z, Fonov VS, Milot S, Leppert I, Degroot C, Durcan TM, Campbell T, Moreau J, Dagher A, Collins DL, Karamchandani J, Bar-Or A, Fon EA, Hoge R, Baillet S, Rouleau G, Evans AC | 28111547 IMAGING |
| 9 | Best practices in data analysis and sharing in neuroimaging using MRI. | Nichols TE, Das S, Eickhoff SB, Evans AC, Glatard T, Hanke M, Kriegeskorte N, Milham MP, Poldrack RA, Poline JB, Proal E, Thirion B, Van Essen DC, White T, Yeo BT | 28230846 IMAGING |
| 10 | Flavanone glycosides inhibit β-site amyloid precursor protein cleaving enzyme 1 and cholinesterase and reduce Aβ aggregation in the amyloidogenic pathway. | Ali MY, Jannat S, Edraki N, Das S, Chang WK, Kim HC, Park SK, Chang MS | 31194956 BIOLOGY |
| 11 | Investigation of inter- and intraspecies variation through genome sequencing of Aspergillus section Nigri. | Vesth TC, Nybo JL, Theobald S, Frisvad JC, Larsen TO, Nielsen KF, Hoof JB, Brandl J, Salamov A, Riley R, Gladden JM, Phatale P, Nielsen MT, Lyhne EK, Kogle ME, Strasser K, McDonnell E, Barry K, Clum A, Chen C, LaButti K, Haridas S, Nolan M, Sandor L, Kuo A, Lipzen A, Hainaut M, Drula E, Tsang A, Magnuson JK, Henrissat B, Wiebenga A, Simmons BA, Mäkelä MR, de Vries RP, Grigoriev IV, Mortensen UH, Baker SE, Andersen MR | 30349117 CSFG |
| 12 | Boutiques: a flexible framework to integrate command-line applications in computing platforms. | Glatard T, Kiar G, Aumentado-Armstrong T, Beck N, Bellec P, Bernard R, Bonnet A, Brown ST, Camarasu-Pop S, Cervenansky F, Das S, Ferreira da Silva R, Flandin G, Girard P, Gorgolewski KJ, Guttmann CRG, Hayot-Sasson V, Quirion PO, Rioux P, Rousseau MÉ, Evans AC | 29718199 ENCS |
| Title: | Data and Tools Integration in the Canadian Open Neuroscience Platform | ||||
| Authors: | Poline JB, Das S, Glatard T, Madjar C, Dickie EW, Lecours X, Beaudry T, Beck N, Behan B, Brown ST, Bujold D, Beauvais M, Caron B, Czech C, Dharsee M, Dugré M, Evans K, Gee T, Ippoliti G, Kiar G, Knoppers BM, Kuehn T, Le D, Lo D, Mazaheri M, MacFarlane D, Muja N, O', Brien EA, O', Callaghan L, Paiva S, Park P, Quesnel D, Rabelais H, Rioux P, Legault M, Tremblay-Mercier J, Rotenberg D, Stone J, Strauss T, Zaytseva K, Zhou J, Duchesne S, Khan AR, Hill S, Evans AC | ||||
| Link: | https://pubmed.ncbi.nlm.nih.gov/37024500/ | ||||
| DOI: | 10.1038/s41597-023-01946-1 | ||||
| Publication: | Scientific data | ||||
| Keywords: | |||||
| PMID: | 37024500 | Category: | Date Added: | 2023-04-07 | |
| Dept Affiliation: |
ENCS
1 McGill University, Montreal Neurological Institute and Hospital, McConnell Brain Imaging Centre, Neuro Data Science ORIGAMI lab, Montreal, Quebec, Canada. jbpoline@gmail.com. 2 McGill University, Healthy Brains Healthy Lives, Neurohub, Montreal, Quebec, Canada. jbpoline@gmail.com. 3 McGill University, McConnell Brain Imaging Centre, Montreal, Quebec, Canada. jbpoline@gmail.com. 4 McGill University, Ludmer Centre for Mental Health, Montreal Neurological Institute, McGill Centre for Integrative Neuroscience, Montreal, Quebec, Canada. 5 Computer Science, Concordia University, Montreal, Quebec, Canada. 6 Krembil Centre for Neuroinformatics, Toronto, Ontario, Canada. 7 Ontario Brain Institute, Toronto, Ontario, Canada. 8 Hewlett Packard Entreprise, Pittsburgh, Pennsylvania, US. 9 McGill University, Canadian Centre for Computational Genomic |
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Description: |
We present the Canadian Open Neuroscience Platform (CONP) portal to answer the research community's need for flexible data sharing resources and provide advanced tools for search and processing infrastructure capacity. This portal differs from previous data sharing projects as it integrates datasets originating from a number of already existing platforms or databases through DataLad, a file level data integrity and access layer. The portal is also an entry point for searching and accessing a large number of standardized and containerized software and links to a computing infrastructure. It leverages community standards to help document and facilitate reuse of both datasets and tools, and already shows a growing community adoption giving access to more than 60 neuroscience datasets and over 70 tools. The CONP portal demonstrates the feasibility and offers a model of a distributed data and tool management system across 17 institutions throughout Canada. |
