Keyword search (4,163 papers available)

"software" Keyword-tagged Publications:

Title Authors PubMed ID
1 Open-source platforms to investigate analytical flexibility in neuroimaging Sanz-Robinson J; Wang M; McPherson B; Chatelain Y; Kennedy D; Glatard T; Poline JB; 40800896
ENCS
2 AAT4IRS: automated acceptance testing for industrial robotic systems Dos Santos MG; Hallé S; Petrillo F; Guéhéneuc YG; 39420929
ENCS
3 ALBA: a model-driven framework for the automatic generation of android location-based apps Gharaat M; Sharbaf M; Zamani B; Hamou-Lhadj A; 38624616
ENCS
4 Web-based processing of physiological noise in fMRI: addition of the PhysIO toolbox to CBRAIN Valevicius D; Beck N; Kasper L; Boroday S; Bayer J; Rioux P; Caron B; Adalat R; Evans AC; Khalili-Mahani N; 37841811
ENCS
5 Introduction to the shared near infrared spectroscopy format Tucker S; Dubb J; Kura S; von Lühmann A; Franke R; Horschig JM; Powell S; Oostenveld R; Lührs M; Delaire É; Aghajan ZM; Yun H; Yücel MA; Fang Q; Huppert TJ; Frederick BB; Pollonini L; Boas D; Luke R; 36507152
ENCS

 

Title:Open-source platforms to investigate analytical flexibility in neuroimaging
Authors:Sanz-Robinson JWang MMcPherson BChatelain YKennedy DGlatard TPoline JB
Link:https://pubmed.ncbi.nlm.nih.gov/40800896/
DOI:10.1162/IMAG.a.79
Publication:Imaging neuroscience (Cambridge, Mass.)
Keywords:analytical flexibilityneuroimagingopen sourcereproducibilitysoftware
PMID:40800896 Category: Date Added:2025-08-13
Dept Affiliation: ENCS
1 NeuroDataScience-ORIGAMI Lab, McConnell Brain Imaging Centre, The Neuro (Montreal Neurological Institute-Hospital), Faculty of Medicine and Health Sciences, McGill University, Montreal, Quebec, Canada.
2 Department of Computer Science and Software Engineering, Concordia University, Montreal, Quebec, Canada.
3 Department of Psychiatry, University of Massachusetts Medical School, Worcester, MA, United States.
4 Krembil Centre for Neuroinformatics, Centre for Addiction and Mental Health, Toronto, Ontario, Canada.

Description:

Researchers in brain imaging have access to a multitude of analysis tools, many of which carry out the same or similar tasks but yield different results when applied to the same data. This analytical flexibility often undermines reproducibility and raises concerns about the robustness of neuroimaging studies. However, the array of software packages to investigate and address analytical flexibility is decentralized, scattered, and not well documented. Consequently, researchers often lack the necessary information and protocols to buttress the reliability of their findings across analytical tools. This review catalogs and describes software platforms (i.e., software or computational libraries) that can be used to address result variability arising from computational pipelines and environments and explores the use of computing platforms and neuroimaging pipeline frameworks in addressing this issue. This study offers guidance to the research community on accessing, understanding, and utilizing these platforms to address brain imaging analytical flexibility. Additionally, the article provides specific recommendations tailored to different user groups, considering the tools they intend to use with these platforms and their computational constraints.





BookR developed by Sriram Narayanan
for the Concordia University School of Health
Copyright © 2011-2026
Cookie settings
Concordia University