PERFORM Publications

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Title		Authors	PubMed ID
1	Comparative Analysis of Enzyme Production Patterns of Lignocellulose Degradation of Two White Rot Fungi: Obba rivulosa and Gelatoporia subvermispora	Marinovíc M; Di Falco M; Aguilar Pontes MV; Gorzsás A; Tsang A; de Vries RP; Mäkelä MR; Hildén K;	35892327 CSFG
2	Predicted coronavirus Nsp5 protease cleavage sites in the human proteome	Scott BM; Lacasse V; Blom DG; Tonner PD; Blom NS;	35379171 ENCS
3	Combination of system biology and classical approaches for developing biorefinery relevant lignocellulolytic Rasamsonia emersonii strain	Raheja Y; Singh V; Kaur B; Basotra N; Di Falco M; Tsang A; Singh Chadha B;	35318142 CSFG
4	Penicillium subrubescens adapts its enzyme production to the composition of plant biomass.	Dilokpimol A, Peng M, Di Falco M, Chin A Woeng T, Hegi RMW, Granchi Z, Tsang A, Hildén KS, Mäkelä MR, de Vries RP	32408196 CSFG
5	Lithocholic bile acid accumulated in yeast mitochondria orchestrates a development of an anti-aging cellular pattern by causing age-related changes in cellular proteome.	Beach A, Richard VR, Bourque S, Boukh-Viner T, Kyryakov P, Gomez-Perez A, Arlia-Ciommo A, Feldman R, Leonov A, Piano A, Svistkova V, Titorenko VI	25839782 MASSSPEC
6	Evaluation of secretome of highly efficient lignocellulolytic Penicillium sp. Dal 5 isolated from rhizosphere of conifers.	Rai R, Kaur B, Singh S, Di Falco M, Tsang A, Chadha BS	27341464 CSFG
7	Isolation and Preparation of Extracellular Proteins from Lignocellulose Degrading Fungi for Comparative Proteomic Studies Using Mass Spectrometry	Robert J Gruninger	28417377 CSFG
8	Mass Spectrometry-Based Proteomics	Marcos Rafael Di Falco	29876812 CSFG
9	The presence of trace components significantly broadens the molecular response of Aspergillus niger to guar gum.	Coconi Linares N, Di Falco M, Benoit-Gelber I, Gruben BS, Peng M, Tsang A, Mäkelä MR, de Vries RP	30797054 CSFG

Title:	Penicillium subrubescens adapts its enzyme production to the composition of plant biomass.
Authors:	Dilokpimol A, Peng M, Di Falco M, Chin A Woeng T, Hegi RMW, Granchi Z, Tsang A, Hildén KS, Mäkelä MR, de Vries RP
Link:	https://www.ncbi.nlm.nih.gov/pubmed/32408196?dopt=Abstract
DOI:	10.1016/j.biortech.2020.123477
Publication:	Bioresource technology
Keywords:	CAZyme; Exoproteome; Penicillium subrubescens; Plant biomass; Transcriptome;
PMID:	32408196	Category:	Bioresour Technol	Date Added:	2020-05-15
Dept Affiliation:	CSFG 1 Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands. 2 Centre for Structural and Functional Genomics, Concordia University, 7141 Sherbrooke West, H4B 1R6 Montreal, Quebec, Canada. 3 GenomeScan B.V, Plesmanlaan 1/D, 2333 BZ Leiden, The Netherlands. 4 Department of Microbiology, University of Helsinki, Viikinkaari 9, Helsinki, Finland. 5 Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands. Electronic address: r.devries@wi.knaw.nl.

Description:

Penicillium subrubescens adapts its enzyme production to the composition of plant biomass.

Bioresour Technol. 2020 May 05;311:123477

Authors: Dilokpimol A, Peng M, Di Falco M, Chin A Woeng T, Hegi RMW, Granchi Z, Tsang A, Hildén KS, Mäkelä MR, de Vries RP

Abstract

Penicillium subrubescens is able to degrade a broad range of plant biomass and it has an expanded set of Carbohydrate Active enzyme (CAZyme)-encoding genes in comparison to other Penicillium species. Here we used exoproteome and transcriptome analysis to demonstrate the versatile plant biomass degradation mechanism by P. subrubescens during growth on wheat bran and sugar beet pulp. On wheat bran P. subrubescens degraded xylan main chain and side residues from Day 2 of cultivation, whereas it started to degrade side chains of pectin in sugar beet pulp prior to attacking the main chain on Day 3. In addition, on Day 3 the cellulolytic enzymes were highly increased. Our results confirm that P. subrubescens adapts its enzyme production to the available plant biomass and is a promising new fungal cell factory for the production of CAZymes.

PMID: 32408196 [PubMed - as supplied by publisher]

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