Keyword search (4,163 papers available)

"metagenomics" Keyword-tagged Publications:

Title Authors PubMed ID
1 Integrated metabolomics and metagenomics analysis identifies a unique signature characterizing metabolic syndrome Wannaiampikul S; Lee B; Chen J; Prentice KJ; Ayansola R; Xu A; Santosa S; Pantopoulos K; Sweeney G; 41794383
HKAP
2 Season and city shape urban bioaerosol composition beyond vegetation and socioeconomic gradients Poirier S; Rondeau-Leclaire J; Faticov M; Roy A; Lajeunesse G; Lucier JF; Tardif S; Kembel SW; Ziter C; Laprise C; Paquette A; Girard C; Laforest-Lapointe I; 41785576
BIOLOGY
3 Rethinking microbial infallibility in the metagenomics era O' Malley MA; Walsh DA; 34160589
BIOLOGY
4 A Novel Freshwater to Marine Evolutionary Transition Revealed within Methylophilaceae Bacteria from the Arctic Ocean Ramachandran A; McLatchie S; Walsh DA; 34154421
BIOLOGY
5 Sediment Metagenomes as Time Capsules of Lake Microbiomes. Garner RE; Gregory-Eaves I; Walsh DA; 33148818
BIOLOGY
6 Diversity, evolution, and classification of virophages uncovered through global metagenomics. Paez-Espino D, Zhou J, Roux S, Nayfach S, Pavlopoulos GA, Schulz F, McMahon KD, Walsh D, Woyke T, Ivanova NN, Eloe-Fadrosh EA, Tringe SG, Kyrpides NC 31823797
BIOLOGY
7 Thermostable xylanases from thermophilic fungi and bacteria: Current perspective. Chadha BS, Kaur B, Basotra N, Tsang A, Pandey A 30679061
CSFG

 

Title:Season and city shape urban bioaerosol composition beyond vegetation and socioeconomic gradients
Authors:Poirier SRondeau-Leclaire JFaticov MRoy ALajeunesse GLucier JFTardif SKembel SWZiter CLaprise CPaquette AGirard CLaforest-Lapointe I
Link:https://pubmed.ncbi.nlm.nih.gov/41785576/
DOI:10.1016/j.scitotenv.2026.181623
Publication:The Science of the total environment
Keywords:AerobiomeBacteriaFungiMetagenomicsMicrobial ecologyPlant particlesUrban ecology
PMID:41785576 Category: Date Added:2026-03-06
Dept Affiliation: BIOLOGY
1 Département de biologie, Université de Sherbrooke, Sherbrooke, Québec, Canada; Réseau de recherche en santé durable lié à la qualité de l'air et de l'environnement sonore (AIRS), CHU Sainte-Justine, Montréal, Québec, Canada; Centre d'Étude de la Forêt, Département des sciences biologiques, Université du Québec à Montréal, Montréal, Québec, Canada. Electronic address: poiriersarah@hotmail.com.
2 Département de biologie, Université de Sherbrooke, Sherbrooke, Québec, Canada. Electronic address: Jonathan.Rondeau.Leclaire@gmail.com.
3 Département de biologie, Université de Sherbrooke, Sherbrooke, Québec, Canada; Centre d'Étude de la Forêt, Département des sciences biologiques, Université du Québec à Montréal, Montréal, Québec, Canada; Department of Wildlife, Fish, and Environmental Studies, Swedish University of Agricultural Sciences, Umeå, Sweden.
4 Département de biologie, Université de Sherbrooke, Sherbrooke, Québec, Canada.
5 Département de biologie, Université de Sherbrooke, Sherbrooke, Québec, Canada; Centre de calcul scientifique, Université de Sherbrooke, Sherbrooke, Québec, Canada.
6 Centre d'Étude de la Forêt, Département des sciences biologiques, Université du Québec à Montréal, Montréal, Québec, Canada.
7 Département des sciences biologiques, Université du Québec à Montréal, Montréal, Québec, Canada.
8 Department of Biology, Concordia University, Montréal, Québec, Canada.
9 Département des Sciences Fondamentales, Université du Québec à Chicoutimi, Chicoutimi, Québec, Canada; Centre intersectoriel en santé durable, Université du Québec à Chicoutimi, Saguenay, QC, Canada.
10 Réseau de recherche en santé durable lié à la qualité de l'air et de l'environnement sonore (AIRS), CHU Sainte-Justine, Montréal, Québec, Canada; Département des Sciences Fondamentales, Université du Québec à Chicoutimi, Chicoutimi, Québec, Canada; Centre intersectoriel en santé durable, Université du Québec à Chicoutimi, Saguenay, QC, Canada; Département de biochimie, de microbiologie et de bio-informatique, Université Laval, Québec, Canada; Centre d'études nordiques (CEN), Université Laval, Québec, Québec, Canada.
11 Département de biologie, Université de Sherbrooke, Sherbrooke, Québec, Canada; Réseau de recherche en santé durable lié à la qualité de l'air et de l'environnement sonore (AIRS), CHU Sainte-Justine, Montréal, Québec, Canada; Centre d'Étude de la Forêt, Département des sciences biologiques, Université du Québec à Montréal, Montréal, Québec, Canada. Electronic address: isabelle.laforest.lapointe@gmail.com.

Description:

Urban vegetation varies with socio-economic gradients, as lower-income neighborhoods often host sparser and less diverse green spaces. This disparity may affect respiratory health by influencing exposure to bioaerosols. Understanding the characteristics of this aerobiome could help anticipate risks related to allergies and other respiratory conditions. Here, we hypothesized that urban vegetation cover and socio-economic status shape urban bioaerosol dynamics. We sampled bioaerosols at 65 sites across three Canadian cities of varying population size and density using an active air sampler over four months, and characterized their bacterial, fungal, and plant particles composition using amplicon sequencing. Seasonal alpha diversity varied significantly for fungi and plant particles. Based on beta diversity, sampling period alone explained up to 40% of plant particle, 29% of fungal, and 11% of bacterial bioaerosol composition variation. In contrast, vegetation cover explained only a minor portion of the variance in bioaerosol composition, and median household income, almost none. These findings provide a critical baseline for understanding the urban aerobiome and highlight the need to study how vegetation identity and diversity, rather than cover alone, may shape bioaerosol dynamics in cities. As cities grow and urban greening initiatives expand, demystifying the aerobiome dynamics becomes an urgent public health priority.





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