| Keyword search (4,163 papers available) | ![]() |
"inverse problem" Keyword-tagged Publications:
| Title | Authors | PubMed ID | |
|---|---|---|---|
| 1 | On the soft tissue ultrasound elastography using FEM based inversion approach | Eshaghinia SS; Taghvaeipour A; Aghdam MM; Rivaz H; | 38240143 ENCS |
| 2 | A Review of Mathematical and Computational Methods in Cancer Dynamics | Uthamacumaran A; Zenil H; | 35957879 PHYSICS |
| 3 | Source imaging of deep-brain activity using the regional spatiotemporal Kalman filter | Hamid L; Habboush N; Stern P; Japaridze N; Aydin Ü; Wolters CH; Claussen JC; Heute U; Stephani U; Galka A; Siniatchkin M; | 33250282 PERFORM |
| 4 | Accuracy and spatial properties of distributed magnetic source imaging techniques in the investigation of focal epilepsy patients. | Pellegrino G, Hedrich T, Porras-Bettancourt M, Lina JM, Aydin Ü, Hall J, Grova C, Kobayashi E | 32386115 PERFORM |
| 5 | Optimal positioning of optodes on the scalp for personalized functional near-infrared spectroscopy investigations. | Machado A, Cai Z, Pellegrino G, Marcotte O, Vincent T, Lina JM, Kobayashi E, Grova C | 30107210 PERFORM |
| Title: | A Review of Mathematical and Computational Methods in Cancer Dynamics | ||||
| Authors: | Uthamacumaran A, Zenil H | ||||
| Link: | https://pubmed.ncbi.nlm.nih.gov/35957879/ | ||||
| DOI: | 10.3389/fonc.2022.850731 | ||||
| Publication: | Frontiers in oncology | ||||
| Keywords: | algorithms; cancer; complex networks; complexity science; dynamical systems; information theory; inverse problems; systems oncology; | ||||
| PMID: | 35957879 | Category: | Date Added: | 2022-08-12 | |
| Dept Affiliation: |
PHYSICS
1 Department of Physics, Concordia University, Montreal, QC, Canada. 2 Machine Learning Group, Department of Chemical Engineering and Biotechnology, The University of Cambridge, Cambridge, United Kingdom. 3 The Alan Turing Institute, British Library, London, United Kingdom. 4 Oxford Immune Algorithmics, Reading, United Kingdom. 5 Algorithmic Dynamics Lab, Karolinska Institute, Stockholm, Sweden. 6 Algorithmic Nature Group, LABORES, Paris, France. |
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Description: |
Cancers are complex adaptive diseases regulated by the nonlinear feedback systems between genetic instabilities, environmental signals, cellular protein flows, and gene regulatory networks. Understanding the cybernetics of cancer requires the integration of information dynamics across multidimensional spatiotemporal scales, including genetic, transcriptional, metabolic, proteomic, epigenetic, and multi-cellular networks. However, the time-series analysis of these complex networks remains vastly absent in cancer research. With longitudinal screening and time-series analysis of cellular dynamics, universally observed causal patterns pertaining to dynamical systems, may self-organize in the signaling or gene expression state-space of cancer triggering processes. A class of these patterns, strange attractors, may be mathematical biomarkers of cancer progression. The emergence of intracellular chaos and chaotic cell population dynamics remains a new paradigm in systems medicine. As such, chaotic and complex dynamics are discussed as mathematical hallmarks of cancer cell fate dynamics herein. Given the assumption that time-resolved single-cell datasets are made available, a survey of interdisciplinary tools and algorithms from complexity theory, are hereby reviewed to investigate critical phenomena and chaotic dynamics in cancer ecosystems. To conclude, the perspective cultivates an intuition for computational systems oncology in terms of nonlinear dynamics, information theory, inverse problems, and complexity. We highlight the limitations we see in the area of statistical machine learning but the opportunity at combining it with the symbolic computational power offered by the mathematical tools explored. |



