Keyword search (4,164 papers available)

"dataset" Keyword-tagged Publications:

Title Authors PubMed ID
1 ADPv2: A hierarchical histological tissue type-annotated dataset for potential biomarker discovery of colorectal disease Yang Z; Li K; Ramandi SG; Brassard P; Khellaf A; Trinh VQ; Zhang J; Chen L; Rowsell C; Varma S; Plataniotis K; Hosseini MS; 41658283
ENCS
2 CACTUS: An open dataset and framework for automated Cardiac Assessment and Classification of Ultrasound images using deep transfer learning Elmekki H; Alagha A; Sami H; Spilkin A; Zanuttini AM; Zakeri E; Bentahar J; Kadem L; Xie WF; Pibarot P; Mizouni R; Otrok H; Singh S; Mourad A; 40107020
ENCS
3 MuscleMap: An Open-Source, Community-Supported Consortium for Whole-Body Quantitative MRI of Muscle McKay MJ; Weber KA; Wesselink EO; Smith ZA; Abbott R; Anderson DB; Ashton-James CE; Atyeo J; Beach AJ; Burns J; Clarke S; Collins NJ; Coppieters MW; Cornwall J; Crawford RJ; De Martino E; Dunn AG; Eyles JP; Feng HJ; Fortin M; Franettovich Smith MM; Galloway G; Gandomkar Z; Glastras S; Henderson LA; Hides JA; Hiller CE; Hilmer SN; Hoggarth MA; Kim B; Lal N; LaPorta L; Magnussen JS; Maloney S; March L; Nackley AG; O' Leary SP; Peolsson A; Perraton Z; Pool-Goudzwaard AL; Schnitzler M; Seitz AL; Semciw AI; Sheard PW; Smith AC; Snodgrass SJ; Sullivan J; Tran V; Valentin S; Walton DM; Wishart LR; Elliott JM; 39590726
HKAP
4 CosSIF: Cosine similarity-based image filtering to overcome low inter-class variation in synthetic medical image datasets Islam M; Zunair H; Mohammed N; 38492455
ENCS
5 Firefly (Coleoptera, Lampyridae) species from the Atlantic Forest hotspot, Brazil Vaz S; Mendes M; Khattar G; Macedo M; Ronquillo C; Zarzo-Arias A; Hortal J; Silveira L; 38327309
CONCORDIA
6 Analysis of input set characteristics and variances on k-fold cross validation for a Recurrent Neural Network model on waste disposal rate estimation Vu HL; Ng KTW; Richter A; An C; 35287077
ENCS
7 Multimodal 3D ultrasound and CT in image-guided spinal surgery: public database and new registration algorithms Masoumi N; Belasso CJ; Ahmad MO; Benali H; Xiao Y; Rivaz H; 33683544
PERFORM
8 Augmented reality mastectomy surgical planning prototype using the HoloLens template for healthcare technology letters. Amini S, Kersten-Oertel M 32038868
PERFORM

 

Title:CACTUS: An open dataset and framework for automated Cardiac Assessment and Classification of Ultrasound images using deep transfer learning
Authors:Elmekki HAlagha ASami HSpilkin AZanuttini AMZakeri EBentahar JKadem LXie WFPibarot PMizouni ROtrok HSingh SMourad A
Link:https://pubmed.ncbi.nlm.nih.gov/40107020/
DOI:10.1016/j.compbiomed.2025.110003
Publication:Computers in biology and medicine
Keywords:Cardiac DatasetConvolutional Neural NetworkImage ClassificationImage GradingTransfer LearningUltrasound Imaging
PMID:40107020 Category: Date Added:2025-03-20
Dept Affiliation: ENCS
1 Concordia Institute for Information Systems Engineering, Concordia University, Montreal, Canada. Electronic address: hanae.elmekki@mail.concordia.ca.
2 Concordia Institute for Information Systems Engineering, Concordia University, Montreal, Canada. Electronic address: ahmed.alagha@mail.concordia.ca.
3 Concordia Institute for Information Systems Engineering, Concordia University, Montreal, Canada; Artificial Intelligence & Cyber Systems Research Center, Department of CSM, Lebanese American University, Beirut, Lebanon. Electronic address: hani.sami@mail.concordia.ca.
4 Department of Mechanical, Industrial and Aerospace Engineering, Concordia University, Montreal, Canada. Electronic address: amanda.spilkin@mail.concordia.ca.
5 Department of Medicine, Laval University, Quebec, Canada. Electronic address: antonela-mariel.zanuttini.1@ulaval.ca.
6 Department of Mechanical, Industrial and Aerospace Engineering, Concordia University, Montreal, Canada. Electronic address: ehsan.zaker

Description:

Cardiac ultrasound (US) scanning is one of the most commonly used techniques in cardiology to diagnose the health of the heart and its proper functioning. During a typical US scan, medical professionals take several images of the heart to be classified based on the cardiac views they contain, with a focus on high-quality images. However, this task is time consuming and error prone. Therefore, it is necessary to consider ways to automate these tasks and assist medical professionals in classifying and assessing cardiac US images. Machine learning (ML) techniques are regarded as a prominent solution due to their success in the development of numerous applications aimed at enhancing the medical field, including addressing the shortage of echography technicians. However, the limited availability of medical data presents a significant barrier to the application of ML in the field of cardiology, particularly regarding US images of the heart. This paper addresses this challenge by introducing the first open graded dataset for Cardiac Assessment and ClassificaTion of UltraSound (CACTUS), which is available online. This dataset contains images obtained from scanning a CAE Blue Phantom and representing various heart views and different quality levels, exceeding the conventional cardiac views typically found in literature. Additionally, the paper introduces a Deep Learning (DL) framework consisting of two main components. The first component is responsible for classifying cardiac US images based on the heart view using a Convolutional Neural Network (CNN) architecture. The second component uses the concept of Transfer Learning (TL) to utilize knowledge from the first component and fine-tune it to create a model for grading and assessing cardiac images. The framework demonstrates high performance in both classification and grading, achieving up to 99.43% accuracy and as low as 0.3067 error, respectively. To showcase its robustness, the framework is further fine-tuned using new images representing additional cardiac views and also compared to several other state-of-the-art architectures. The framework's outcomes and its performance in handling real-time scans were also assessed using a questionnaire answered by cardiac experts.





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