Keyword search (4,164 papers available)

"algorithms" Keyword-tagged Publications:

Title Authors PubMed ID
1 Artificial intelligence-assisted identification of condensing osteitis and idiopathic osteosclerosis on panoramic radiographs Yuksel IB; Boudesh A; Ghanbarzadehchaleshtori M; Ozsoy SC; Bahrilli S; Mohammadi R; Altindag A; 40790082
ENCS
2 Clustering and Interpretability of Residential Electricity Demand Profiles Kallel S; Amayri M; Bouguila N; 40218540
ENCS
3 Robustness and evolvability: Revisited, redefined and applied Kharma N; Bédard-Couture R; 39098381
ENCS
4 An intelligent decision support system for groundwater supply management and electromechanical infrastructure controls Ataei P; Takhtravan A; Gheibi M; Chahkandi B; Faramarz MG; Waclawek S; Fathollahi-Fard AM; Behzadian K; 38317976
ENCS
5 A Review of Mathematical and Computational Methods in Cancer Dynamics Uthamacumaran A; Zenil H; 35957879
PHYSICS

 

Title:A Review of Mathematical and Computational Methods in Cancer Dynamics
Authors:Uthamacumaran AZenil H
Link:https://pubmed.ncbi.nlm.nih.gov/35957879/
DOI:10.3389/fonc.2022.850731
Publication:Frontiers in oncology
Keywords:algorithmscancercomplex networkscomplexity sciencedynamical systemsinformation theoryinverse problemssystems oncology
PMID:35957879 Category: Date Added:2022-08-12
Dept Affiliation: PHYSICS
1 Department of Physics, Concordia University, Montreal, QC, Canada.
2 Machine Learning Group, Department of Chemical Engineering and Biotechnology, The University of Cambridge, Cambridge, United Kingdom.
3 The Alan Turing Institute, British Library, London, United Kingdom.
4 Oxford Immune Algorithmics, Reading, United Kingdom.
5 Algorithmic Dynamics Lab, Karolinska Institute, Stockholm, Sweden.
6 Algorithmic Nature Group, LABORES, Paris, France.

Description:

Cancers are complex adaptive diseases regulated by the nonlinear feedback systems between genetic instabilities, environmental signals, cellular protein flows, and gene regulatory networks. Understanding the cybernetics of cancer requires the integration of information dynamics across multidimensional spatiotemporal scales, including genetic, transcriptional, metabolic, proteomic, epigenetic, and multi-cellular networks. However, the time-series analysis of these complex networks remains vastly absent in cancer research. With longitudinal screening and time-series analysis of cellular dynamics, universally observed causal patterns pertaining to dynamical systems, may self-organize in the signaling or gene expression state-space of cancer triggering processes. A class of these patterns, strange attractors, may be mathematical biomarkers of cancer progression. The emergence of intracellular chaos and chaotic cell population dynamics remains a new paradigm in systems medicine. As such, chaotic and complex dynamics are discussed as mathematical hallmarks of cancer cell fate dynamics herein. Given the assumption that time-resolved single-cell datasets are made available, a survey of interdisciplinary tools and algorithms from complexity theory, are hereby reviewed to investigate critical phenomena and chaotic dynamics in cancer ecosystems. To conclude, the perspective cultivates an intuition for computational systems oncology in terms of nonlinear dynamics, information theory, inverse problems, and complexity. We highlight the limitations we see in the area of statistical machine learning but the opportunity at combining it with the symbolic computational power offered by the mathematical tools explored.





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