Keyword search (4,163 papers available)

"Segmentation" Keyword-tagged Publications:

Title Authors PubMed ID
1 Towards user-centered interactive medical image segmentation in VR with an assistive AI agent Spiegler P; Harirpoush A; Xiao Y; 41509996
ENCS
2 MedCLIP-SAMv2: Towards universal text-driven medical image segmentation Koleilat T; Asgariandehkordi H; Rivaz H; Xiao Y; 40779830
ENCS
3 Exploring interaction paradigms for segmenting medical images in virtual reality Jones Z; Drouin S; Kersten-Oertel M; 40402355
ENCS
4 MRI as a viable alternative to CT for 3D surgical planning of Cavitary bone tumors Chae Y; Cheers GM; Kim M; Reidler P; Klein A; Fevens T; Holzapfel BM; Mayer-Wagner S; 40049253
ENCS
5 Open access segmentations of intraoperative brain tumor ultrasound images Behboodi B; Carton FX; Chabanas M; de Ribaupierre S; Solheim O; Munkvold BKR; Rivaz H; Xiao Y; Reinertsen I; 39047165
SOH
6 FishSegSSL: A Semi-Supervised Semantic Segmentation Framework for Fish-Eye Images Paul S; Patterson Z; Bouguila N; 38535151
ENCS
7 Impaired performance of rapid grip in people with Parkinson's disease and motor segmentation Rebecca J Daniels 38507858
PSYCHOLOGY
8 PILLAR: ParaspInaL muscLe segmentAtion pRoject - a comprehensive online resource to guide manual segmentation of paraspinal muscles from magnetic resonance imaging Anstruther M; Rossini B; Zhang T; Liang T; Xiao Y; Fortin M; 37996857
SOH
9 Compatible-domain Transfer Learning for Breast Cancer Classification with Limited Annotated Data Shamshiri MA; Krzyzak A; Kowal M; Korbicz J; 36758326
ENCS
10 Measures of motor segmentation from rapid isometric force pulses are reliable and differentiate Parkinson's disease from age-related slowing Howard SL; Grenet D; Bellumori M; Knight CA; 35768733
PSYCHOLOGY
11 Spoken Word Segmentation in First and Second Language: When ERP and Behavioral Measures Diverge Gilbert AC; Lee JG; Coulter K; Wolpert MA; Kousaie S; Gracco VL; Klein D; Titone D; Phillips NA; Baum SR; 34603133
PSYCHOLOGY
12 Sharp U-Net: Depthwise convolutional network for biomedical image segmentation Zunair H; Ben Hamza A; 34348214
ENCS
13 LUMINOUS database: lumbar multifidus muscle segmentation from ultrasound images Belasso CJ; Behboodi B; Benali H; Boily M; Rivaz H; Fortin M; 33097024
PERFORM
14 Two-stage ultrasound image segmentation using U-Net and test time augmentation. Amiri M; Brooks R; Behboodi B; Rivaz H; 32350786
IMAGING
15 Statistical learning of multiple speech streams: A challenge for monolingual infants. Benitez VL, Bulgarelli F, Byers-Heinlein K, Saffran JR, Weiss DJ 31444822
CONCORDIA
16 High resolution atlas of the venous brain vasculature from 7 T quantitative susceptibility maps. Huck J, Wanner Y, Fan AP, Jäger AT, Grahl S, Schneider U, Villringer A, Steele CJ, Tardif CL, Bazin PL, Gauthier CJ 31278570
PSYCHOLOGY
17 The first MICCAI challenge on PET tumor segmentation. Hatt M, Laurent B, Ouahabi A, Fayad H, Tan S, Li L, Lu W, Jaouen V, Tauber C, Czakon J, Drapejkowski F, Dyrka W, Camarasu-Pop S, Cervenansky F, Girard P, Glatard T, Kain M, Yao Y, Barillot C, Kirov A, Visvikis D 29268169
IMAGING
18 A dataset of multi-contrast population-averaged brain MRI atlases of a Parkinson׳s disease cohort. Xiao Y, Fonov V, Chakravarty MM, Beriault S, Al Subaie F, Sadikot A, Pike GB, Bertrand G, Collins DL 28491942
PERFORM

 

Title:PILLAR: ParaspInaL muscLe segmentAtion pRoject - a comprehensive online resource to guide manual segmentation of paraspinal muscles from magnetic resonance imaging
Authors:Anstruther MRossini BZhang TLiang TXiao YFortin M
Link:https://pubmed.ncbi.nlm.nih.gov/37996857/
DOI:10.1186/s12891-023-07029-x
Publication:BMC musculoskeletal disorders
Keywords:Fat infiltrationLow back painLumbar spineMagnetic resonance imagingManual segmentation
PMID:37996857 Category: Date Added:2023-11-24
Dept Affiliation: SOH
1 Department Health Kinesiology and Applied Physiology, Concordia University, 7141 Sherbrooke Street W, SP-165.29, Montreal, QC, H4B 1R6, Canada.
2 Department of Computer Science and Software Engineering, Concordia University, Montreal, QC, Canada.
3 School of Health, Concordia University, Montreal, QC, Canada.
4 Department Health Kinesiology and Applied Physiology, Concordia University, 7141 Sherbrooke Street W, SP-165.29, Montreal, QC, H4B 1R6, Canada. maryse.fortin@concordia.ca.
5 School of Health, Concordia University, Montreal, QC, Canada. maryse.fortin@concordia.ca.
6 Centre de Recherche Interdisciplinaire en Réadaptation (CRIR), Montreal, QC, Canada. maryse.fortin@concordia.ca.

Description:

Background: There is an increasing interest in assessing paraspinal morphology and composition in relation to low back pain (LBP). However, variations in methods and segmentation protocols contribute to the inconsistent findings in the literature. We present an on-line resource, the ParaspInaL muscLe segmentAtion pRoject (PILLAR, https://projectpillar.github.io/ ), to provide a detailed description and visual guide of a segmentation protocol by using the publicly available ITK-SNAP software and discuss related challenges when performing paraspinal lumbar muscles segmentations from magnetic resonance imaging (MRI).

Methods: T2-weighted and corresponding fat-water IDEAL axial MRI from 3 males and 3 females (2 chronic LBP and 1 control for each sex) were used to demonstrate our segmentation protocol for each lumbar paraspinal muscle (erector spinae, lumbar multifidus, quadratus lumborum and psoas) and lumbar spinal level (L1-L5).

Results: Proper segmentation requires an understanding of the anatomy of paraspinal lumbar muscles and the variations in paraspinal muscle morphology and composition due to age, sex, and the presence of LBP or related spinal pathologies. Other challenges in segmentation includes the presence and variations of intramuscular and epimuscular fat, and side-to-side asymmetry.

Conclusion: The growing interest to assess the lumbar musculature and its role in the development and recurrence of LBP prompted the need for comprehensive and easy-to-follow resources, such as the PILLAR project to reduce inconsistencies in segmentation protocols. Standardizing manual muscle measurements from MRI will facilitate comparisons between studies while the field is progressively moving towards the automatization of paraspinal muscle measurements for large cohort studies.





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