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The emergence of automated manufacturing of composites has not only transformed the manufacturing of optimized and geometrically complex structures but has also expanded the promising prospect of in-situ manufacturing of thermoplastic composites (TPC), where both material placement and consolidation are carried out by automated fiber placement (AFP) equipment, streamlining the process into single step manufacturing. However, the inherent complexities in different aspects of robotic automation, imperfections in the supplied material, and the occurrence of multi-physical phenomena during in-situ consolidation introduce various manufacturing-induced defects. While the defects in thermoset composites (TSC) made by AFP have been widely studied in the past, this study explores the diverse defects at micro and macro scales for TPCs made by AFP, with a focus on carbon-fiber/poly-ether-ether-ketone (CF/PEEK) tapes consolidated using hot gas torch (HGT) heating system. An overview of defects and associated characteristics is presented across three phases: defects in supplied impregnated tapes, defects and limitations in performance of AFP system, and defects in the final in-situ consolidated composite. For the defects subject to studies in the past, the description is limited to a concise review, while those with limited understanding are supported by new empirical observations in this work.