Keyword search (4,163 papers available)

Concordia Publications:

Title Authors PubMed ID
1 Class imbalance should not throw you off balance: Choosing the right classifiers and performance metrics for brain decoding with imbalanced data Thölke P; Mantilla-Ramos YJ; Abdelhedi H; Maschke C; Dehgan A; Harel Y; Kemtur A; Mekki Berrada L; Sahraoui M; Young T; Bellemare Pépin A; El Khantour C; Landry M; Pascarella A; Hadid V; Combrisson E; O' Byrne J; Jerbi K; 37385392
IMAGING
2 A dataset of multi-contrast unbiased average MRI templates of a Parkinson's disease population Madge V; Fonov VS; Xiao Y; Zou L; Jackson C; Postuma RB; Dagher A; Fon EA; Collins DL; 37213552
IMAGING
3 Primary and Secondary Progressive Aphasia in Posterior Cortical Atrophy Brodeur C; Belley É; Deschênes LM; Enriquez-Rosas A; Hubert M; Guimond A; Bilodeau J; Soucy JP; Macoir J; 35629330
IMAGING
4 Associations of the BDNF Val66Met Polymorphism With Body Composition, Cardiometabolic Risk Factors, and Energy Intake in Youth With Obesity: Findings From the HEARTY Study Goldfield GS; Walsh J; Sigal RJ; Kenny GP; Hadjiyannakis S; De Lisio M; Ngu M; Prud' homme D; Alberga AS; Doucette S; Goldfield DB; Cameron JD; 34867148
IMAGING
5 The BigBrainWarp toolbox for integration of BigBrain 3D histology with multimodal neuroimaging Paquola C; Royer J; Lewis LB; Lepage C; Glatard T; Wagstyl K; DeKraker J; Toussaint PJ; Valk SL; Collins DL; Khan A; Amunts K; Evans AC; Dickscheid T; Bernhardt BC; 34431476
IMAGING
6 Lateral Position-Dependent Velocity Estimation Error in Plane-Wave Doppler Ultrasound Systems Wei L; Williams R; Loupas T; Helfield B; Burns PN; 34006440
IMAGING
7 Tools and Techniques for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2)/COVID-19 Detection Safiabadi Tali SH; LeBlanc JJ; Sadiq Z; Oyewunmi OD; Camargo C; Nikpour B; Armanfard N; Sagan SM; Jahanshahi-Anbuhi S; 33980687
IMAGING
8 Comparing perturbation models for evaluating stability of neuroimaging pipelines. Kiar G, de Oliveira Castro P, Rioux P, Petit E, Brown ST, Evans AC, Glatard T 32831546
IMAGING
9 Two-stage ultrasound image segmentation using U-Net and test time augmentation. Amiri M; Brooks R; Behboodi B; Rivaz H; 32350786
IMAGING
10 BOLD signal physiology: Models and applications. Gauthier CJ, Fan AP 29544818
IMAGING
11 Exploring the alpha desynchronization hypothesis in resting state networks with intracranial electroencephalography and wiring cost estimates. Gómez-Ramírez J, Freedman S, Mateos D, Pérez Velázquez JL, Valiante TA 29142213
IMAGING
12 Dance and music share gray matter structural correlates. Karpati FJ, Giacosa C, Foster NEV, Penhune VB, Hyde KL 27923638
IMAGING
13 Cyberinfrastructure for Open Science at the Montreal Neurological Institute. Das S, Glatard T, Rogers C, Saigle J, Paiva S, MacIntyre L, Safi-Harab M, Rousseau ME, Stirling J, Khalili-Mahani N, MacFarlane D, Kostopoulos P, Rioux P, Madjar C, Lecours-Boucher X, Vanamala S, Adalat R, Mohaddes Z, Fonov VS, Milot S, Leppert I, Degroot C, Durcan TM, Campbell T, Moreau J, Dagher A, Collins DL, Karamchandani J, Bar-Or A, Fon EA, Hoge R, Baillet S, Rouleau G, Evans AC 28111547
IMAGING
14 Best practices in data analysis and sharing in neuroimaging using MRI. Nichols TE, Das S, Eickhoff SB, Evans AC, Glatard T, Hanke M, Kriegeskorte N, Milham MP, Poldrack RA, Poline JB, Proal E, Thirion B, Van Essen DC, White T, Yeo BT 28230846
IMAGING
15 Neuroimaging tests for clinical psychiatry: Are we there yet? Leyton M, Kennedy SH 28639935
IMAGING
16 Experimental Investigation of Left Ventricular Flow Patterns After Percutaneous Edge-to-Edge Mitral Valve Repair. Jeyhani M, Shahriari S, Labrosse M 29168199
IMAGING
17 The first MICCAI challenge on PET tumor segmentation. Hatt M, Laurent B, Ouahabi A, Fayad H, Tan S, Li L, Lu W, Jaouen V, Tauber C, Czakon J, Drapejkowski F, Dyrka W, Camarasu-Pop S, Cervenansky F, Girard P, Glatard T, Kain M, Yao Y, Barillot C, Kirov A, Visvikis D 29268169
IMAGING
18 Cluster based statistical feature extraction method for automatic bleeding detection in wireless capsule endoscopy video. Ghosh T, Fattah SA, Wahid KA, Zhu WP, Ahmad MO 29407997
IMAGING
19 Muscle Mass and Mortality After Cardiac Transplantation. Bibas L, Saleh E, Al-Kharji S, Chetrit J, Mullie L, Cantarovich M, Cecere R, Giannetti N, Afilalo J 29877924
IMAGING
20 Efficacy of Auditory versus Motor Learning for Skilled and Novice Performers. Brown RM, Penhune VB 30156505
IMAGING

 

Title:Best practices in data analysis and sharing in neuroimaging using MRI.
Authors:Nichols TEDas SEickhoff SBEvans ACGlatard THanke MKriegeskorte NMilham MPPoldrack RAPoline JBProal EThirion BVan Essen DCWhite TYeo BT
Link:https://www.ncbi.nlm.nih.gov/pubmed/28230846?dopt=Abstract
DOI:10.1038/nn.4500
Publication:Nature neuroscience
Keywords:
PMID:28230846 Category:Nat Neurosci Date Added:2019-06-20
Dept Affiliation: IMAGING
1 University of Warwick, Coventry, UK.
2 McGill University, Montreal, Canada.
3 Montreal Neurological Institute, Montreal, Canada.
4 Institute of Neuroscience and Medicine (INM-1), Jülich Research Center, Jülich, Germany.
5 Institute for Systems Neuroscience, Medical Faculty, Heinrich-Heine University Düsseldorf, Düsseldorf, Germany.
6 Department of Computer Science and Software Engineering, Concordia University, Montreal, Canada.
7 Otto-von-Guericke-University, Magdeburg, Germany.
8 Center for Behavioral Brain Sciences, Magdeburg, Germany.
9 MRC Cognition and Brain Sciences Unit, Cambridge, UK.
10 Child Mind Institute, New York, New York, USA.
11 Nathan S. Kline Institute for Psychiatric Research, Orangeburg, New York, USA.
12 Stanford University, Stanford, California, USA.
13 University of California, Berkeley, California, USA.
14 NEUROingenia Clinical and Research Center, Mexico City, Mexico.
15 Inria, Paris-Saclay University, Paris, France.
16 Washington University in St. Louis, St. Louis, Missouri, USA.
17 Erasmus University Medical Center, Rotterdam, The Netherlands.
18 National University of Singapore, Singapore.

Description:

Best practices in data analysis and sharing in neuroimaging using MRI.

Nat Neurosci. 2017 Feb 23;20(3):299-303

Authors: Nichols TE, Das S, Eickhoff SB, Evans AC, Glatard T, Hanke M, Kriegeskorte N, Milham MP, Poldrack RA, Poline JB, Proal E, Thirion B, Van Essen DC, White T, Yeo BT

Abstract

Given concerns about the reproducibility of scientific findings, neuroimaging must define best practices for data analysis, results reporting, and algorithm and data sharing to promote transparency, reliability and collaboration. We describe insights from developing a set of recommendations on behalf of the Organization for Human Brain Mapping and identify barriers that impede these practices, including how the discipline must change to fully exploit the potential of the world's neuroimaging data.

PMID: 28230846 [PubMed - indexed for MEDLINE]





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