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PubMed Publications| Keyword search (4,163 papers available) |  |
"Reid I" Authored Publications:
| Title | Authors | PubMed ID | |
|---|---|---|---|
| 1 | Global survey of secondary metabolism in em Aspergillus niger /em via activation of specific transcription factors | Semper C; Pham TTM; Ram S; Palys S; Evdokias G; Ouedraogo JP; Moisan MC; Geoffrion N; Reid I; Di Falco M; Bailey Z; Tsang A; Benoit-Gelber I; Savchenko A; | 40852424 GENOMICS |
| 2 | Loss of function of the carbon catabolite repressor CreA leads to low but inducer-independent expression from the feruloyl esterase B promoter in Aspergillus niger | Reijngoud J; Arentshorst M; Ruijmbeek C; Reid I; Alazi ED; Punt PJ; Tsang A; Ram AFJ; | 33738610 CSFG |
| 3 | Functional Characterization of Clinical Isolates of the Opportunistic Fungal Pathogen Aspergillus nidulans. | Bastos RW, Valero C, Silva LP, Schoen T, Drott M, Brauer V, Silva-Rocha R, Lind A, Steenwyk JL, Rokas A, Rodrigues F, Resendiz-Sharpe A, Lagrou K, Marcet-Houben M, Gabaldón T, McDonnell E, Reid I, Tsang A, Oakley BR, Loures FV, Almeida F, Huttenlocher A, Keller NP, Ries LNA, Goldman GH | 32269156 CSFG |
| 4 | SnowyOwl: accurate prediction of fungal genes by using RNA-Seq and homology information to select among ab initio models. | Reid I, O'Toole N, Zabaneh O, Nourzadeh R, Dahdouli M, Abdellateef M, Gordon PM, Soh J, Butler G, Sensen CW, Tsang A | 24980894 CSFG |
| 5 | Identification of Genes Involved in the Degradation of Lignocellulose Using Comparative Transcriptomics. | Gruninger RJ, Reid I, Forster RJ, Tsang A, McAllister TA | 28417376 CSFG |
| 6 | Evaluating Programs for Predicting Genes and Transcripts with RNA-Seq Support in Fungal Genomes. | Reid I | 29876820 CSFG |
| Title: | Evaluating Programs for Predicting Genes and Transcripts with RNA-Seq Support in Fungal Genomes. | ||||
| Authors: | Reid I | ||||
| Link: | https://www.ncbi.nlm.nih.gov/pubmed/29876820?dopt=Abstract | ||||
| DOI: | 10.1007/978-1-4939-7804-5_17 | ||||
| Publication: | Methods in molecular biology (Clifton, N.J.) | ||||
| Keywords: | Bioinformatics; Cleaning short sequence reads; Gene prediction; RNA-Seq; Transcript prediction; | ||||
| PMID: | 29876820 | Category: | Methods Mol Biol | Date Added: | 2019-06-07 |
| Dept Affiliation: |
CSFG
1 Centre for Structural and Functional Genomics, Concordia University, Montreal, QC, Canada. ian.reid@concordia.ca. |
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Description: |
Evaluating Programs for Predicting Genes and Transcripts with RNA-Seq Support in Fungal Genomes. Methods Mol Biol. 2018;1775:209-227 Authors: Reid I Abstract PMID: 29876820 [PubMed - indexed for MEDLINE] |
