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PubMed Publications| Keyword search (4,163 papers available) |  |
"Mercado LD" Authored Publications:
| Title | Authors | PubMed ID | |
|---|---|---|---|
| 1 | De novo evolution of antibiotic resistance to Oct-TriA1 | Chowdhury FR; Mercado LD; Kharitonov K; Findlay BL; | 39832423 BIOLOGY |
| 2 | Roles of inter- and intramolecular tryptophan interactions in membrane-active proteins revealed by racemic protein crystallography | Lander AJ; Mercado LD; Li X; Taily IM; Findlay BL; Jin Y; Luk LYP; | 37464011 CHEMBIOCHEM |
| Title: | Roles of inter- and intramolecular tryptophan interactions in membrane-active proteins revealed by racemic protein crystallography | ||||
| Authors: | Lander AJ, Mercado LD, Li X, Taily IM, Findlay BL, Jin Y, Luk LYP | ||||
| Link: | https://pubmed.ncbi.nlm.nih.gov/37464011/ | ||||
| DOI: | 10.1038/s42004-023-00953-y | ||||
| Publication: | Communications chemistry | ||||
| Keywords: | |||||
| PMID: | 37464011 | Category: | Date Added: | 2023-07-19 | |
| Dept Affiliation: |
CHEMBIOCHEM
1 School of Chemistry, Cardiff University, Main Building, Park Place, Cardiff, CF10 3AT, UK. 2 Department of Chemistry & Biochemistry, Richard J. Renaud Science Complex, Concordia University, Montréal, Québec, H4B 1R6, Canada. 3 Department of Chemistry & Biochemistry, Richard J. Renaud Science Complex, Concordia University, Montréal, Québec, H4B 1R6, Canada. brandon.findlay@concordia.ca. 4 Manchester Institute of Biotechnology, University of Manchester, Manchester, M1 7DN, UK. yi.jin@manchester.ac.uk. 5 School of Chemistry, Cardiff University, Main Building, Park Place, Cardiff, CF10 3AT, UK. lukly@cardiff.ac.uk. |
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Description: |
Tryptophan is frequently found on the surface of membrane-associated proteins that interact with the lipid membrane. However, because of their multifaceted interactions, it is difficult to pinpoint the structure-activity relationship of each tryptophan residue. Here, we describe the use of racemic protein crystallography to probe dedicated tryptophan interactions of a model tryptophan-rich bacteriocin aureocin A53 (AucA) by inclusion and/or exclusion of potential ligands. In the presence of tetrahedral anions that are isosteric to the head group of phospholipids, distinct tryptophan H-bond networks were revealed. H-bond donation by W40 was critical for antibacterial activity, as its substitution by 1-methyltryptophan resulted in substantial loss of activity against bacterial clinical isolates. Meanwhile, exclusion of tetrahedral ions revealed that W3 partakes in formation of a dimeric interface, thus suggesting that AucA is dimeric in solution and dissociated to interact with the phosphate head group in the presence of the lipid membrane. Based on these findings, we could predict the tryptophan residue responsible for activity as well as the oligomeric state of a distant homologue lacticin Q (48%). |
