Keyword search (4,163 papers available)

"Colatriano D" Authored Publications:

Title Authors PubMed ID
1 Diversity and biogeography of SAR11 bacteria from the Arctic Ocean. Kraemer S, Ramachandran A, Colatriano D, Lovejoy C, Walsh DA 31501503
BIOLOGY
2 Genomic evidence for the degradation of terrestrial organic matter by pelagic Arctic Ocean Chloroflexi bacteria. Colatriano D, Tran PQ, Guéguen C, Williams WJ, Lovejoy C, Walsh DA 30271971
BIOLOGY
3 Deconstructing the genetic basis of spent sulphite liquor tolerance using deep sequencing of genome-shuffled yeast. Pinel D, Colatriano D, Jiang H, Lee H, Martin VJ 25866561
CSFG

 

Title:Diversity and biogeography of SAR11 bacteria from the Arctic Ocean.
Authors:Kraemer SRamachandran AColatriano DLovejoy CWalsh DA
Link:https://www.ncbi.nlm.nih.gov/pubmed/31501503?dopt=Abstract
DOI:10.1038/s41396-019-0499-4
Publication:The ISME journal
Keywords:
PMID:31501503 Category:ISME J Date Added:2019-09-11
Dept Affiliation: BIOLOGY
1 Department of Biology, Concordia University, 7141 Sherbrooke St. West, Montreal, QC, H4B 1R6, Canada.
2 Département de biologie, Institut de Biologie Intégrative et des Systèmes (IBIS) and Québec-Océan, Université Laval, Quebec City, QC, G1K 7P4, Canada.
3 Department of Biology, Concordia University, 7141 Sherbrooke St. West, Montreal, QC, H4B 1R6, Canada. david.walsh@concordia.ca.

Description:

Diversity and biogeography of SAR11 bacteria from the Arctic Ocean.

ISME J. 2019 Sep 09;:

Authors: Kraemer S, Ramachandran A, Colatriano D, Lovejoy C, Walsh DA

Abstract

The Arctic Ocean is relatively isolated from other oceans and consists of strongly stratified water masses with distinct histories, nutrient, temperature, and salinity characteristics, therefore providing an optimal environment to investigate local adaptation. The globally distributed SAR11 bacterial group consists of multiple ecotypes that are associated with particular marine environments, yet relatively little is known about Arctic SAR11 diversity. Here, we examined SAR11 diversity using ITS analysis and metagenome-assembled genomes (MAGs). Arctic SAR11 assemblages were comprised of the S1a, S1b, S2, and S3 clades, and structured by water mass and depth. The fresher surface layer was dominated by an ecotype (S3-derived P3.2) previously associated with Arctic and brackish water. In contrast, deeper waters of Pacific origin were dominated by the P2.3 ecotype of the S2 clade, within which we identified a novel subdivision (P2.3s1) that was rare outside the Arctic Ocean. Arctic S2-derived SAR11 MAGs were restricted to high latitudes and included MAGs related to the recently defined S2b subclade, a finding consistent with bi-polar ecotypes and Arctic endemism. These results place the stratified Arctic Ocean into the SAR11 global biogeography and have identified SAR11 lineages for future investigation of adaptive evolution in the Arctic Ocean.

PMID: 31501503 [PubMed - as supplied by publisher]





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