The removal of NH₄⁺, NO₃^-, and NH₃^- from wastewater can be difficult and expensive. Through physical, chemical, and biological processes, metals and nutrients can be extracted from wastewater. Very few scientific investigations have employed surfactants with high biodegradability, low toxicity, and suitability for ion removal from wastewater at different pH and salinity levels. This research employed a highly biodegradable biosurfactant generated from yeast (sophorolipid) through micellar-enhanced ultrafiltration (MEUF). MEUF improves nutrient removal efficiency and reduces costs by using less pressure than reverse osmosis (RO) and nanofiltration (NF). The biosurfactant can be recovered after the removal of nutrient- and ion-containing micelles from the filtration membrane. During the experiment, numerous variables, including temperature, pH, biosurfactant concentration, pollutant ions, etc., were evaluated. The highest amount of PO₄^3- was eliminated at a pH of 6.0, which was reported at 94.9%. Maximum NO₃^- removal occurred at 45.0 °C (96.9%), while maximum NH₄⁺ removal occurred at 25.0 mg/L (94.5%). Increasing TMP to 200 kPa produced the maximum membrane flow of 226 L/h/m². The concentrations of the contaminating ion and sophorolipid were insignificant in the permeate, demonstrating the high potential of this approach.